RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.97□□□□□ -0.17
PTBP1-216ENST00000590887 CDR2LQ86X02 465 aaPredicted RBP13.97□□□□□ -0.17
PTBP1-216ENST00000590887 DEFB118Q96PH6 123 aa13.97□□□□□ -0.17
PTBP1-216ENST00000590887 UBQLN1Q9UMX0 589 aaKnown RBP13.97□□□□□ -0.17
PTBP1-216ENST00000590887 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
PTBP1-216ENST00000590887 NOC2LQ9Y3T9 749 aaKnown RBP13.97□□□□□ -0.17
PTBP1-216ENST00000590887 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 ATP8B3O60423 1300 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 KIF5CO60282 957 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 CHRNA1P02708 482 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 TFRCP02786 760 aaKnown RBP13.96□□□□□ -0.17
PTBP1-216ENST00000590887 KRT19P08727 400 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 NOP14P78316 857 aaKnown RBP13.96□□□□□ -0.17
PTBP1-216ENST00000590887 PTK2Q05397 1052 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 SLC18A3Q16572 532 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 ZNF699Q32M78 642 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 SLC10A6Q3KNW5 377 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 TOGARAM2Q6ZUX3 1019 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 IRF2BP2Q7Z5L9 587 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 FAM228AQ86W67 206 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 ZNF677Q86XU0 584 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 ANKLE1Q8NAG6 615 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 HELQQ8TDG4 1101 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 PPP1R13LQ8WUF5 828 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 SEMA4DQ92854 862 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 PPP1R13BQ96KQ4 1090 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 CALR3Q96L12 384 aaKnown RBP13.96□□□□□ -0.17
PTBP1-216ENST00000590887 FTHL17Q9BXU8 183 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 MTMR12Q9C0I1 747 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 SNTG2Q9NY99 539 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 ARHGAP20Q9P2F6 1191 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 PARP2Q9UGN5 583 aa13.96□□□□□ -0.17
PTBP1-216ENST00000590887 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 EVI5O60447 810 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 STAU1O95793 577 aaKnown RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 ASS1P00966 412 aaKnown RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 CTSHP09668 335 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 ITGA4P13612 1032 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 TNNT1P13805 278 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 CYP3A5P20815 502 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 PNPLA4P41247 253 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 PDE6CP51160 858 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 CUL2Q13617 745 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 IFI16Q16666 785 aaKnown RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 FBXO47Q5MNV8 452 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 ARHGEF19Q8IW93 802 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 FAM71AQ8IYT1 594 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 CEP120Q8N960 986 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 OR5B17Q8NGF7 314 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 TMEM40Q8WWA1 233 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 SHC3Q92529 594 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 IFIH1Q9BYX4 1025 aaKnown RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 NIF3L1Q9GZT8 377 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 TRMT13Q9NUP7 481 aaKnown RBP13.95□□□□□ -0.18
PTBP1-216ENST00000590887 DPP3Q9NY33 737 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 PAXBP1Q9Y5B6 917 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 PCDHA13Q9Y5I0 950 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 RALGAPA2Q2PPJ7 1873 aa13.95□□□□□ -0.18
PTBP1-216ENST00000590887 CCDC85CA6NKD9 419 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 DCDC2CA8MYV0 355 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 RBAK-RBAKDNI3L0D1 243 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 SGPL1O95470 568 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 CKBP12277 381 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 KRT5P13647 590 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 ANK1P16157 1881 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 PAX3P23760 479 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 CDK7P50613 346 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 VAV2P52735 878 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 HGSNATQ68CP4 663 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 GJB7Q6PEY0 223 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 SNX27Q96L92 541 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 ZNF560Q96MR9 790 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 EIF2AQ9BY44 585 aaKnown RBP13.94□□□□□ -0.18
PTBP1-216ENST00000590887 VRTNQ9H8Y1 702 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 CYP3A43Q9HB55 503 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 ERVK-5Q9HDB9 667 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 FAM105AQ9NUU6 356 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 CNTN3Q9P232 1028 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 IPPQ9Y573 584 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 PCDHB2Q9Y5E7 798 aa13.94□□□□□ -0.18
PTBP1-216ENST00000590887 ZNF623O75123 536 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 LRRN2O75325 713 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 RECQL4O94761 1208 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 VNN1O95497 513 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 NFICP08651 508 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 KCNE1P15382 129 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 SELPP16109 830 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 TNNC1P63316 161 aa13.93□□□□□ -0.18
PTBP1-216ENST00000590887 APBA1Q02410 837 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms