RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, human

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB6-208	ENST00000590388	LRPAP1	P30533	357 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	CLCN4	P51793	760 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	BMT2	Q1RMZ1	405 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	RTP2	Q5QGT7	225 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	FAM171A1	Q5VUB5	890 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	KIAA1841	Q6NSI8	718 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	ANKRD54	Q6NXT1	300 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	SYCE2	Q6PIF2	218 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	FSIP1	Q8NA03	581 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	HASPIN	Q8TF76	798 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	SUSD6	Q92537	303 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	HPS3	Q969F9	1004 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	C18orf25	Q96B23	403 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	UHRF1	Q96T88	793 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	TTPAL	Q9BTX7	342 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	S1PR5	Q9H228	398 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	BLZF1	Q9H2G9	400 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	GOLPH3L	Q9H4A5	285 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	PRKAG3	Q9UGI9	489 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	TUBGCP4	Q9UGJ1	667 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	UBQLN1	Q9UMX0	589 aa	Known RBP	13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	C2CD2	Q9Y426	696 aa		13.57	□□□□□ -0.24
TUBB6-208	ENST00000590388	C2orf16	Q68DN1	1984 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	DLL1	O00548	723 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	C2CD2L	O14523	706 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	TEX28	O15482	410 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	XPOT	O43592	962 aa	Known RBP	13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	TRAPPC3	O43617	180 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	PAPLN	O95428	1278 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	ADH1A	P07327	375 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	FGFR3	P22607	806 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	IGFBP6	P24592	240 aa	Predicted RBP	13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	CA8	P35219	290 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	ACOT2	P49753	483 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	SNRPF	P62306	86 aa	Known RBP	13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	CLUL1	Q15846	466 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	SPATA1	Q5VX52	437 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	LLGL2	Q6P1M3	1020 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	PDXDC1	Q6P996	788 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	GRAMD1C	Q8IYS0	662 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	SYCP3	Q8IZU3	236 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	TMEM87A	Q8NBN3	555 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	SCFD1	Q8WVM8	642 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	RIN2	Q8WYP3	895 aa	Predicted RBP	13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	KIF12	Q96FN5	646 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	B3GALT6	Q96L58	329 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	SCN1A	P35498	2009 aa		13.56	□□□□□ -0.24
TUBB6-208	ENST00000590388	TSC2	P49815	1807 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	ZNF202	O95125	648 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	IL18RAP	O95256	599 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	LDHA	P00338	332 aa	Known RBP	13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	EPCAM	P16422	314 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	KLRC2	P26717	231 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	PSMD2	Q13200	908 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	TPRN	Q4KMQ1	711 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	KRBA2	Q6ZNG9	492 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	NT5DC4	Q86YG4	428 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	BRSK2	Q8IWQ3	736 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	LNX1	Q8TBB1	728 aa	Predicted RBP	13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	HDAC7	Q8WUI4	952 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	SUSD3	Q96L08	255 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	CBWD1	Q9BRT8	395 aa		13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	USP15	Q9Y4E8	981 aa	Predicted RBP	13.55	□□□□□ -0.24
TUBB6-208	ENST00000590388	SYN3	O14994	580 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	TGFB1I1	O43294	461 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	EXTL3	O43909	919 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	NFIC	P08651	508 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	PAX3	P23760	479 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	BRCC3	P46736	316 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	AARS	P49588	968 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	ITIH3	Q06033	890 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	SPAG1	Q07617	926 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	DPYD	Q12882	1025 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	TMEM132D	Q14C87	1099 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	PSMD5	Q16401	504 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	JADE1	Q6IE81	842 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	ARMCX5	Q6P1M9	558 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	LILRA6	Q6PI73	481 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	ADHFE1	Q8IWW8	467 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	C12orf56	Q8IXR9	622 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	KIAA0895	Q8NCT3	520 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	BEST2	Q8NFU1	509 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	FBXL18	Q96ME1	805 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	CLSTN3	Q9BQT9	956 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	RHOBTB2	Q9BYZ6	727 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	ADAM7	Q9H2U9	754 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	EXOC1	Q9NV70	894 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	CGN	Q9P2M7	1197 aa	Known RBP	13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	MTRR	Q9UBK8	725 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	DPP7	Q9UHL4	492 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	BACE2	Q9Y5Z0	518 aa		13.54	□□□□□ -0.24
TUBB6-208	ENST00000590388	ANO9	A1A5B4	782 aa		13.53	□□□□□ -0.24
TUBB6-208	ENST00000590388	C19orf67	A6NJJ6	358 aa		13.53	□□□□□ -0.24
TUBB6-208	ENST00000590388		M0QZQ0	153 aa		13.53	□□□□□ -0.24
TUBB6-208	ENST00000590388	GLUD1	P00367	558 aa		13.53	□□□□□ -0.24
TUBB6-208	ENST00000590388	TKT	P29401	623 aa	Known RBP	13.53	□□□□□ -0.24
TUBB6-208	ENST00000590388	ANP32A	P39687	249 aa	Known RBP	13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms