RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 RTP3Q9BQQ7 232 aa15.68■□□□□ 0.1
MBD1-220ENST00000589758 CDH7Q9ULB5 785 aa15.68■□□□□ 0.1
MBD1-220ENST00000589758 POLIQ9UNA4 740 aa15.68■□□□□ 0.1
MBD1-220ENST00000589758 DOCK8Q8NF50 2099 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 CCL16O15467 120 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 FAM13AO94988 1023 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 CFHP08603 1231 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 CLTAP09496 248 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 SRFP11831 508 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 NPR3P17342 541 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 AOC1P19801 751 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 ELF1P32519 619 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
MBD1-220ENST00000589758 HTR4Q13639 388 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 SF3A1Q15459 793 aaKnown RBP15.67■□□□□ 0.1
MBD1-220ENST00000589758 SLC10A6Q3KNW5 377 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 VARS2Q5ST30 1063 aaKnown RBP15.67■□□□□ 0.1
MBD1-220ENST00000589758 CWF19L1Q69YN2 538 aaKnown RBP15.67■□□□□ 0.1
MBD1-220ENST00000589758 SLC8B1Q6J4K2 584 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 GPBP1Q86WP2 473 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 SIX5Q8N196 739 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 ZNF461Q8TAF7 563 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 BICD1Q96G01 975 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 PHOX2BQ99453 314 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 REEP2Q9BRK0 252 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 PARVGQ9HBI0 331 aa15.67■□□□□ 0.1
MBD1-220ENST00000589758 PIEZO1Q92508 2521 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 H0Y858 1186 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 KRT18P05783 430 aaKnown RBP15.66■□□□□ 0.1
MBD1-220ENST00000589758 SYT1P21579 422 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 LIG4P49917 911 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 ROR1Q01973 937 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 DHX8Q14562 1220 aaKnown RBP15.66■□□□□ 0.1
MBD1-220ENST00000589758 SEZ6Q53EL9 994 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 RSPO2Q6UXX9 243 aaPredicted RBP15.66■□□□□ 0.1
MBD1-220ENST00000589758 MTSS1LQ765P7 747 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 MYCT1Q8N699 235 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 RAD54LQ92698 747 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 FGF13Q92913 245 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 C18orf25Q96B23 403 aaPredicted RBP15.66■□□□□ 0.1
MBD1-220ENST00000589758 SUSD3Q96L08 255 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 TSPAN18Q96SJ8 248 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 SLC2A4RGQ9NR83 387 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 BLOC1S4Q9NUP1 217 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 KCNH3Q9ULD8 1083 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 TBX20Q9UMR3 447 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 NUMBLQ9Y6R0 609 aa15.66■□□□□ 0.1
MBD1-220ENST00000589758 MEFVO15553 781 aaPredicted RBP15.65■□□□□ 0.1
MBD1-220ENST00000589758 XPOTO43592 962 aaKnown RBP15.65■□□□□ 0.1
MBD1-220ENST00000589758 TRAK2O60296 914 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 TBC1D4O60343 1298 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 ABLIM3O94929 683 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 PIGRP01833 764 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 RFX1P22670 979 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 MARCKSP29966 332 aaPredicted RBP15.65■□□□□ 0.1
MBD1-220ENST00000589758 MCM4P33991 863 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 ZNF131P52739 623 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 NTHL1P78549 312 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 MRPL58Q14197 206 aaKnown RBP15.65■□□□□ 0.1
MBD1-220ENST00000589758 MCM6Q14566 821 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 PABPC1LQ4VXU2 614 aaKnown RBP15.65■□□□□ 0.1
MBD1-220ENST00000589758 APPL2Q8NEU8 664 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 CCSER1Q9C0I3 900 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 FAM86C1Q9NVL1 165 aa15.65■□□□□ 0.1
MBD1-220ENST00000589758 UBQLN1Q9UMX0 589 aaKnown RBP15.65■□□□□ 0.1
MBD1-220ENST00000589758 TTC26A0AVF1 554 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 ARHGEF37A1IGU5 675 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 WDR27A2RRH5 827 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 K7ENM7 598 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 STK25O00506 426 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 PRRG1O14668 218 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 HNRNPDLO14979 420 aaKnown RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 LRG1P02750 347 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 CXCL8P10145 99 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 ATF2P15336 505 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 PTPN2P17706 415 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 PLCG1P19174 1290 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 CYP3A5P20815 502 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 GRIN1Q05586 938 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 PPP2R3AQ06190 1150 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 PDCD11Q14690 1871 aaKnown RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 KARSQ15046 597 aaKnown RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 CTXN3Q4LDR2 81 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 TPGS2Q68CL5 300 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 ZNF280DQ6N043 979 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 TCEAL8Q8IYN2 117 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 GPR152Q8TDT2 470 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 LARP4BQ92615 738 aaKnown RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 OXCT2Q9BYC2 517 aaPredicted RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 HAPLN2Q9GZV7 340 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 AVENQ9NQS1 362 aaPredicted RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 DNMT3BQ9UBC3 853 aaKnown RBP15.64■□□□□ 0.09
MBD1-220ENST00000589758 CA14Q9ULX7 337 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 MAFFQ9ULX9 164 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 PCDHB8Q9UN66 801 aa15.64■□□□□ 0.09
MBD1-220ENST00000589758 KRBA1A5PL33 1030 aa15.63■□□□□ 0.09
MBD1-220ENST00000589758 OGTO15294 1046 aa15.63■□□□□ 0.09
MBD1-220ENST00000589758 TBCAO75347 108 aaKnown RBP15.63■□□□□ 0.09
MBD1-220ENST00000589758 LRPAP1P30533 357 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms