RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
VAT1-206ENST00000589709 HAUS6Q7Z4H7 955 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
VAT1-206ENST00000589709 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
VAT1-206ENST00000589709 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 ARHGEF37A1IGU5 675 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 KRBA1A5PL33 1030 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 H7C4K7 107 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 CCL16O15467 120 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 PI15O43692 258 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 CFHP08603 1231 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 CLTAP09496 248 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 LONP1P36776 959 aaKnown RBP13.34□□□□□ -0.27
VAT1-206ENST00000589709 ZNF131P52739 623 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 NTHL1P78549 312 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 CUL4AQ13619 759 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 KYAT1Q16773 422 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 PHLDB3Q6NSJ2 640 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 MTSS1LQ765P7 747 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 CCDC105Q8IYK2 499 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 FGF13Q92913 245 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 C18orf25Q96B23 403 aaPredicted RBP13.34□□□□□ -0.27
VAT1-206ENST00000589709 SUSD3Q96L08 255 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 TSPAN18Q96SJ8 248 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 AVENQ9NQS1 362 aaPredicted RBP13.34□□□□□ -0.27
VAT1-206ENST00000589709 BLOC1S4Q9NUP1 217 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 FAM86C1Q9NVL1 165 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 ANKFY1Q9P2R3 1169 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 MAFFQ9ULX9 164 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 NUB1Q9Y5A7 615 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 NUMBLQ9Y6R0 609 aa13.34□□□□□ -0.27
VAT1-206ENST00000589709 NPHP3-ACAD11A0A0J9YXS1 232 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 TTC26A0AVF1 554 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 PIGRP01833 764 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 HARSP12081 509 aaKnown RBP13.33□□□□□ -0.28
VAT1-206ENST00000589709 ATF2P15336 505 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 CYP3A5P20815 502 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 ABCD1P33897 745 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 NBL1P41271 181 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 ROR1Q01973 937 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 ZBTB6Q15916 424 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 PABPC1LQ4VXU2 614 aaKnown RBP13.33□□□□□ -0.28
VAT1-206ENST00000589709 TPGS2Q68CL5 300 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 GPBP1Q86WP2 473 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 APPL2Q8NEU8 664 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 REEP2Q9BRK0 252 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 CCSER1Q9C0I3 900 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 HAPLN2Q9GZV7 340 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 DNMT3BQ9UBC3 853 aaKnown RBP13.33□□□□□ -0.28
VAT1-206ENST00000589709 FBXL5Q9UKA1 691 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 TBX20Q9UMR3 447 aa13.33□□□□□ -0.28
VAT1-206ENST00000589709 DOCK6Q96HP0 2047 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 WDR27A2RRH5 827 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 GFRA3O60609 400 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 ADRB2P07550 413 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 PTPN2P17706 415 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 PDCP20941 246 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 LRPAP1P30533 357 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 ELF1P32519 619 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
VAT1-206ENST00000589709 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
VAT1-206ENST00000589709 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 PARM1Q6UWI2 310 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 MYCT1Q8N699 235 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 DTWD2Q8NBA8 298 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 ITFG1Q8TB96 612 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 LRRC15Q8TF66 581 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 RAD54LQ92698 747 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 FGF14Q92915 247 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 RPP25Q9BUL9 199 aaKnown RBP13.32□□□□□ -0.28
VAT1-206ENST00000589709 PARVGQ9HBI0 331 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 ARHGEF3Q9NR81 526 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 HCFC1R1Q9NWW0 138 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 GDE1Q9NZC3 331 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 UBQLN1Q9UMX0 589 aaKnown RBP13.32□□□□□ -0.28
VAT1-206ENST00000589709 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
VAT1-206ENST00000589709 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
VAT1-206ENST00000589709 CITO14578 2027 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 M0QZQ0 153 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 OGTO15294 1046 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 TRAK2O60296 914 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 FAM189A1O60320 539 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 MICAL2O94851 1124 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 FAM13AO94988 1023 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 CXCL8P10145 99 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 PLCG1P19174 1290 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 MCM4P33991 863 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 DDIT3P35638 169 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 MATR3P43243 847 aaKnown RBP eCLIP13.31□□□□□ -0.28
VAT1-206ENST00000589709 LIG4P49917 911 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 GTF2BQ00403 316 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 GRIN1Q05586 938 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 MCM6Q14566 821 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 CTXN3Q4LDR2 81 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 ZNF280DQ6N043 979 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 CD302Q8IX05 232 aa13.31□□□□□ -0.28
VAT1-206ENST00000589709 NPAS3Q8IXF0 933 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms