RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 KIF12Q96FN5 646 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 FAM81BQ96LP2 452 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 PI4K2AQ9BTU6 479 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 SOWAHDA6NJG2 315 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 STAT1P42224 750 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 DRAP1Q14919 205 aaPredicted RBP23.98■■□□□ 1.43
ATG4D-209ENST00000588857 ASIC2Q16515 512 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 ARHGAP44Q17R89 818 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 C1orf53Q5VUE5 145 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 KIAA1524Q8TCG1 905 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 TOX2Q96NM4 488 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 AIPL1Q9NZN9 384 aa23.98■■□□□ 1.43
ATG4D-209ENST00000588857 R3HCC1Q9Y3T6 440 aaKnown RBP23.98■■□□□ 1.43
ATG4D-209ENST00000588857 RAB27AP51159 221 aa23.97■■□□□ 1.43
ATG4D-209ENST00000588857 MBTPS1Q14703 1052 aa23.97■■□□□ 1.43
ATG4D-209ENST00000588857 TRIM60Q495X7 471 aa23.97■■□□□ 1.43
ATG4D-209ENST00000588857 CHP1Q99653 195 aa23.97■■□□□ 1.43
ATG4D-209ENST00000588857 IFIH1Q9BYX4 1025 aaKnown RBP23.97■■□□□ 1.43
ATG4D-209ENST00000588857 F8VZ95 297 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 RBAK-RBAKDNI3L0D1 243 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 CST3P01034 146 aaPredicted RBP23.96■■□□□ 1.43
ATG4D-209ENST00000588857 KRT19P08727 400 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 ITGA4P13612 1032 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 KCNJ6P48051 423 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 ARID5AQ03989 594 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 TLE2Q04725 743 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 DSC3Q14574 896 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 SGSM1Q2NKQ1 1148 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 E4F1Q66K89 784 aaPredicted RBP23.96■■□□□ 1.43
ATG4D-209ENST00000588857 ALKAL1Q6UXT8 129 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 ENOSF1Q7L5Y1 443 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 TATDN2Q93075 761 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 TSPAN18Q96SJ8 248 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 ADAM2Q99965 735 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 TRAIPQ9BWF2 469 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 RNF39Q9H2S5 420 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 CNTN3Q9P232 1028 aa23.96■■□□□ 1.43
ATG4D-209ENST00000588857 CEP290O15078 2479 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 SERPING1P05155 500 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 SKIP12755 728 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 SOX5P35711 763 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 GCNT1Q02742 428 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 C1orf127Q8N9H9 656 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 HELQQ8TDG4 1101 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 DPP3Q9NY33 737 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 KLK14Q9P0G3 267 aa23.95■■□□□ 1.43
ATG4D-209ENST00000588857 MGEA5O60502 916 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 CCDC172P0C7W6 258 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 FERP16591 822 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 MYL6P60660 151 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 FAAP100Q0VG06 881 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 GPIHBP1Q8IV16 184 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 TANC1Q9C0D5 1861 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 HIPK3Q9H422 1215 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 NHEJ1Q9H9Q4 299 aaPredicted RBP23.95■■□□□ 1.42
ATG4D-209ENST00000588857 ITGA11Q9UKX5 1188 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 ATP11BQ9Y2G3 1177 aa23.95■■□□□ 1.42
ATG4D-209ENST00000588857 ASS1P00966 412 aaKnown RBP23.94■■□□□ 1.42
ATG4D-209ENST00000588857 ITGB3P05106 788 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 NOP14P78316 857 aaKnown RBP23.94■■□□□ 1.42
ATG4D-209ENST00000588857 KLHL30Q0D2K2 578 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 MTF1Q14872 753 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 TDRD12Q587J7 1177 aaKnown RBP23.94■■□□□ 1.42
ATG4D-209ENST00000588857 SPOPLQ6IQ16 392 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 RAD9BQ6WBX8 426 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 TAF4BQ92750 862 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 ELMO3Q96BJ8 720 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 CCDC42Q96M95 316 aa23.94■■□□□ 1.42
ATG4D-209ENST00000588857 ZMYND8Q9ULU4 1186 aaPredicted RBP23.94■■□□□ 1.42
ATG4D-209ENST00000588857 BZW2Q9Y6E2 419 aaKnown RBP23.94■■□□□ 1.42
ATG4D-209ENST00000588857 A0A0U1RQF3 1178 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 SMIM28A0A1B0GU29 152 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 FOXN3O00409 490 aaPredicted RBP23.93■■□□□ 1.42
ATG4D-209ENST00000588857 XPOTO43592 962 aaKnown RBP23.93■■□□□ 1.42
ATG4D-209ENST00000588857 ZNF623O75123 536 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 GFPT2O94808 682 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 KCNE1P15382 129 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 TBXAS1P24557 533 aaPredicted RBP23.93■■□□□ 1.42
ATG4D-209ENST00000588857 ZNF699Q32M78 642 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 XKR4Q5GH76 650 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 MRPL10Q7Z7H8 261 aaKnown RBP23.93■■□□□ 1.42
ATG4D-209ENST00000588857 CCDC170Q8IYT3 715 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 BEST2Q8NFU1 509 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 KAT5Q92993 513 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 KREMEN1Q96MU8 473 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 ZMAT2Q96NC0 199 aaKnown RBP23.93■■□□□ 1.42
ATG4D-209ENST00000588857 FTHL17Q9BXU8 183 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 GPR88Q9GZN0 384 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 CXCL16Q9H2A7 254 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 DEF6Q9H4E7 631 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 ARHGAP20Q9P2F6 1191 aa23.93■■□□□ 1.42
ATG4D-209ENST00000588857 COLQQ9Y215 455 aaPredicted RBP23.93■■□□□ 1.42
ATG4D-209ENST00000588857 PNMA6AP0CW24 399 aaPredicted RBP23.92■■□□□ 1.42
ATG4D-209ENST00000588857 CYLC1P35663 651 aaPredicted RBP23.92■■□□□ 1.42
ATG4D-209ENST00000588857 RBP5P82980 135 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 ZBTB6Q15916 424 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 GLRA4Q5JXX5 417 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 HGSNATQ68CP4 663 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 IRF2BP2Q7Z5L9 587 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 PGBD4Q96DM1 585 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms