RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NGRNQ9NPE2 291 aaKnown RBP9.81□□□□□ -0.84
CIRBP-218ENST00000588344 INTS13Q9NVM9 706 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 DPP3Q9NY33 737 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 DNAJB4Q9UDY4 337 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 ARMCX3Q9UH62 379 aaPredicted RBP9.81□□□□□ -0.84
CIRBP-218ENST00000588344 ITGA11Q9UKX5 1188 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 PLAGL2Q9UPG8 496 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 SIP14410 1827 aa9.81□□□□□ -0.84
CIRBP-218ENST00000588344 ANO9A1A5B4 782 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 SMTNL1A8MU46 457 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 PODXLO00592 558 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 MEFVO15553 781 aaPredicted RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 FGF18O76093 207 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 LINC00271P0C7V0 271 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 DLATP10515 647 aaKnown RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 POU3F3P20264 500 aaPredicted RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 ATICP31939 592 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 SLC11A1P49279 550 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 CASP4P49662 377 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 CLCNKBP51801 687 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 PMS1P54277 932 aaKnown RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 MARSP56192 900 aaKnown RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 STX17P56962 302 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 GPM6BQ13491 265 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 GLRA4Q5JXX5 417 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 PDXDC1Q6P996 788 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 LRRC52Q8N7C0 313 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 CCDC127Q96BQ5 260 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 BORCS6Q96GS4 357 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 OXCT2Q9BYC2 517 aaPredicted RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 MAGEC2Q9UBF1 373 aaPredicted RBP9.8□□□□□ -0.84
CIRBP-218ENST00000588344 ADAM28Q9UKQ2 775 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 NUB1Q9Y5A7 615 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 LAMA3Q16787 3333 aa9.8□□□□□ -0.84
CIRBP-218ENST00000588344 SF3B1O75533 1304 aaKnown RBP eCLIP9.8□□□□□ -0.841e-6■■■■■ 35.3
CIRBP-218ENST00000588344 FSD2A1L4K1 749 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 TRIM49BA6NDI0 452 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 CASTOR2A6NHX0 329 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
CIRBP-218ENST00000588344 SOX1O00570 391 aaPredicted RBP9.79□□□□□ -0.84
CIRBP-218ENST00000588344 PIRO00625 290 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 PMM2O15305 246 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 LPXNO60711 386 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 N4BP1O75113 896 aaKnown RBP9.79□□□□□ -0.84
CIRBP-218ENST00000588344 PHACTR2O75167 634 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 NFICP08651 508 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 FAM163BP0C2L3 166 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 CREMQ03060 361 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 CETN1Q12798 172 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 MYO1EQ12965 1108 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 TRPC3Q13507 836 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 USP41Q3LFD5 358 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 ZSCAN23Q3MJ62 389 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 SV2CQ496J9 727 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 CCDC40Q4G0X9 1142 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 C9orf57Q5W0N0 161 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 SPPL3Q8TCT6 385 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 TAF4BQ92750 862 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 PPP2R3CQ969Q6 453 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 FAXDC2Q96IV6 333 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 ZNF560Q96MR9 790 aa9.79□□□□□ -0.84
CIRBP-218ENST00000588344 PRG3Q9Y2Y8 225 aaPredicted RBP9.79□□□□□ -0.84
CIRBP-218ENST00000588344 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SYCE3A1L190 88 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 LRRIQ3A6PVS8 624 aaPredicted RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 NT5C1B-RDH14C9J2C7 533 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 RBAK-RBAKDNI3L0D1 243 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SYN3O14994 580 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 P4HA2O15460 535 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 ARHGEF15O94989 841 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 STAU1O95793 577 aaKnown RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 C1RP00736 705 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SOD2P04179 222 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 ITGB1P05556 798 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TPM2P07951 284 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 CTSAP10619 480 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 P4HA1P13674 534 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 EEF1GP26641 437 aaKnown RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TAF6P49848 677 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 FXR1P51114 621 aaKnown RBP eCLIP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 LILRA4P59901 499 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 MYL5Q02045 173 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SPAG1Q07617 926 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 KRT39Q6A163 491 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 KIAA1841Q6NSI8 718 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 TMC7Q7Z402 723 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 C1orf127Q8N9H9 656 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 CCDC150Q8NCX0 1101 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 APPL2Q8NEU8 664 aa9.78□□□□□ -0.84
CIRBP-218ENST00000588344 ANKRD20A12PQ8NF67 263 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms