RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 CSTF1Q05048 431 aaKnown RBP17.2■□□□□ 0.34
NCLN-203ENST00000587740 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 TFDP1Q14186 410 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 DHX8Q14562 1220 aaKnown RBP17.2■□□□□ 0.34
NCLN-203ENST00000587740 UBXN2BQ14CS0 331 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 RINT1Q6NUQ1 792 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
NCLN-203ENST00000587740 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
NCLN-203ENST00000587740 RAD54LQ92698 747 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
NCLN-203ENST00000587740 BLOC1S4Q9NUP1 217 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 STK17AQ9UEE5 414 aa17.2■□□□□ 0.34
NCLN-203ENST00000587740 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 SPTLC1O15269 473 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 CCL16O15467 120 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 LAMTOR5O43504 91 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 TADA2AO75478 443 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 STAT6P42226 847 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 ATXN1P54253 815 aaKnown RBP17.19■□□□□ 0.34
NCLN-203ENST00000587740 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 PRKCQQ04759 706 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 GRIK3Q13003 919 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 CAPSQ13938 189 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 MCM6Q14566 821 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
NCLN-203ENST00000587740 ADALQ6DHV7 355 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 C1orf186Q6ZWK4 172 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 ZBTB44Q8NCP5 570 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 NELL1Q92832 810 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 TIPINQ9BVW5 301 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 OSBPL6Q9BZF3 934 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
NCLN-203ENST00000587740 LTB4R2Q9NPC1 389 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 NCDNQ9UBB6 729 aa17.19■□□□□ 0.34
NCLN-203ENST00000587740 MAP1BP46821 2468 aaKnown RBP17.19■□□□□ 0.34
NCLN-203ENST00000587740 SHISA7A6NL88 538 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 NPTXRO95502 500 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 C8AP07357 584 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 HNRNPA1P09651 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
NCLN-203ENST00000587740 TGM1P22735 817 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 GLRA2P23416 452 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 CREMQ03060 361 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 RESP18Q5W5W9 173 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 POTEHQ6S545 545 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 PDILTQ8N807 584 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 PIK3R5Q8WYR1 880 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 IFT74Q96LB3 600 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 KXD1Q9BQD3 176 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 RUSC1Q9BVN2 902 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 GDPD2Q9HCC8 539 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 HCFC1R1Q9NWW0 138 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 PCDHGA2Q9Y5H1 932 aa17.18■□□□□ 0.34
NCLN-203ENST00000587740 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.347e-7■■■■■ 53.4
NCLN-203ENST00000587740 A0A1B0GUA9 196 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 LILRB5O75023 590 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 HIP1RO75146 1068 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 KIF4AO95239 1232 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 GUCY2CP25092 1073 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 TARSP26639 723 aaKnown RBP17.17■□□□□ 0.34
NCLN-203ENST00000587740 HOXA9P31269 272 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
NCLN-203ENST00000587740 FZD5Q13467 585 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 PSMD5Q16401 504 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 PPM1LQ5SGD2 360 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 FAM171A1Q5VUB5 890 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 SLC27A1Q6PCB7 646 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 TSSK4Q6SA08 328 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 SV2BQ7L1I2 683 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 GPBP1Q86WP2 473 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 CEP57Q86XR8 500 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 CLDN23Q96B33 292 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 BORCS6Q96GS4 357 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 DRC1Q96MC2 740 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 TTPALQ9BTX7 342 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 ZSCAN32Q9NX65 697 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 CHD8Q9HCK8 2581 aa17.17■□□□□ 0.34
NCLN-203ENST00000587740 ZMYM2Q9UBW7 1377 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 A0A087X0B3 334 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 LRRIQ4A6NIV6 560 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 PTGESO14684 152 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
NCLN-203ENST00000587740 CMA1P23946 247 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 IGFBP6P24592 240 aaPredicted RBP17.16■□□□□ 0.34
NCLN-203ENST00000587740 RAD51AP2Q09MP3 1159 aa17.16■□□□□ 0.34
NCLN-203ENST00000587740 TUSC3Q13454 348 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms