RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TMCO5BA8MYB1 307 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 YY1P25490 414 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 SGSM1Q2NKQ1 1148 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 NOTUMQ6P988 496 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 SLC27A1Q6PCB7 646 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 TMEM40Q8WWA1 233 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 CDC23Q9UJX2 597 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 JRKLQ9Y4A0 524 aa21.32■■□□□ 1
TRIM47-204ENST00000587339 DYNC1I1O14576 645 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 GNRH1P01148 92 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 ATP1A1P05023 1023 aaKnown RBP21.31■■□□□ 1
TRIM47-204ENST00000587339 ASGR1P07306 291 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 CRYBB1P53674 252 aaPredicted RBP21.31■■□□□ 1
TRIM47-204ENST00000587339 MYL6P60660 151 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 SLC10A6Q3KNW5 377 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 TAF3Q5VWG9 929 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 SCARA3Q6AZY7 606 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 JADE1Q6IE81 842 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 PALB2Q86YC2 1186 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 ERO1AQ96HE7 468 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 MEFVO15553 781 aaPredicted RBP21.31■■□□□ 1
TRIM47-204ENST00000587339 NFICP08651 508 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 GRM5P41594 1212 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 GALCP54803 685 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 KCNA10Q16322 511 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 FAM47CQ5HY64 1035 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 MAP3K21Q5TCX8 1036 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 MNS1Q8NEH6 495 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 CCDC94Q9BW85 323 aaPredicted RBP21.31■■□□□ 1
TRIM47-204ENST00000587339 CARD6Q9BX69 1037 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 MROH7Q68CQ1 1323 aa21.31■■□□□ 1
TRIM47-204ENST00000587339 NPTXRO95502 500 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 AXLP30530 894 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 AMPD2Q01433 879 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 CDR2Q01850 454 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 PAPD7Q5XG87 772 aaKnown RBP21.3■■□□□ 1
TRIM47-204ENST00000587339 KLHDC9Q8NEP7 349 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 PXYLP1Q8TE99 480 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 UMODL1Q5DID0 1318 aa21.3■■□□□ 1
TRIM47-204ENST00000587339 MMEP08473 750 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 CHRNB2P17787 502 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 ACO1P21399 889 aaKnown RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 CST5P28325 142 aaPredicted RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 BPIFB4P59827 614 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 HTRA3P83110 453 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 ZNF699Q32M78 642 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 GDF6Q6KF10 455 aaPredicted RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 CTNNBL1Q8WYA6 563 aaPredicted RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 TAS2R14Q9NYV8 317 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 PCDHB2Q9Y5E7 798 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 SAR1BQ9Y6B6 198 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 TRIP12Q14669 1992 aaPredicted RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 SCN10AQ9Y5Y9 1956 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 HTTP42858 3142 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 KRT19P08727 400 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 TMEM253P0C7T8 217 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 FMO1Q01740 532 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 IFI16Q16666 785 aaKnown RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 TMEM270Q6UE05 265 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 C1orf127Q8N9H9 656 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 PCSK9Q8NBP7 692 aaKnown RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 TSC1Q92574 1164 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 CELF4Q9BZC1 486 aaKnown RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 TRIM6Q9C030 488 aaPredicted RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 NIF3L1Q9GZT8 377 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 DDX20Q9UHI6 824 aaKnown RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 PIN4Q9Y237 131 aaKnown RBP21.29■■□□□ 1
TRIM47-204ENST00000587339 PCDHB4Q9Y5E5 795 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 PCDHGC5Q9Y5F6 944 aa21.29■■□□□ 1
TRIM47-204ENST00000587339 A0A0A6YYK5 440 aaPredicted RBP21.28■■□□□ 1
TRIM47-204ENST00000587339 M0QZ92 97 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 PALMO75781 387 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 ANK1P16157 1881 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 ABCB4P21439 1286 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 NOP2P46087 812 aaKnown RBP21.28■■□□□ 1
TRIM47-204ENST00000587339 RSPH3Q86UC2 560 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 CD302Q8IX05 232 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 DDX1Q92499 740 aaKnown RBP21.28■■□□□ 1
TRIM47-204ENST00000587339 EIF2AQ9BY44 585 aaKnown RBP21.28■■□□□ 1
TRIM47-204ENST00000587339 XYLT2Q9H1B5 865 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 ISCUQ9H1K1 167 aa21.28■■□□□ 1
TRIM47-204ENST00000587339 ANKRD62A6NC57 917 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 GZMAP12544 262 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 TMEM132DQ14C87 1099 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 CCSAPQ6IQ19 270 aaPredicted RBP21.27■■□□□ 1
TRIM47-204ENST00000587339 LRRN4CLQ8ND94 238 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 TAF4BQ92750 862 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 PCDHB18PQ96TA0 734 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 C2CD2Q9Y426 696 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 RTN2O75298 545 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 FTLP02792 175 aaPredicted RBP21.27■■□□□ 1
TRIM47-204ENST00000587339 ITGB3P05106 788 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 MRPS6P82932 125 aaKnown RBP21.27■■□□□ 1
TRIM47-204ENST00000587339 ARHGEF6Q15052 776 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 RNF180Q86T96 592 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 ZNF677Q86XU0 584 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 NT5DC4Q86YG4 428 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 PLEKHA5Q9HAU0 1116 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 SNTG2Q9NY99 539 aa21.27■■□□□ 1
TRIM47-204ENST00000587339 SIX4Q9UIU6 781 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms