RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 COL6A1P12109 1028 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 ATF7P17544 494 aaPredicted RBP9.18□□□□□ -0.94
NPC1-204ENST00000586718 ATICP31939 592 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 HNRNPH3P31942 346 aaKnown RBP9.18□□□□□ -0.94
NPC1-204ENST00000586718 SOX5P35711 763 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 WNT7BP56706 349 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 JAM2P57087 298 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 KLHL30Q0D2K2 578 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 SGSM1Q2NKQ1 1148 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 SLC10A6Q3KNW5 377 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 TRIM60Q495X7 471 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 GJB7Q6PEY0 223 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 ARHGEF19Q8IW93 802 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 CCDC170Q8IYT3 715 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 SEPT8Q92599 483 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 JAKMIP2Q96AA8 810 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 CCDC42Q96M95 316 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 DNAI2Q9GZS0 605 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 NIF3L1Q9GZT8 377 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 HIPK3Q9H422 1215 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 AGO3Q9H9G7 860 aaKnown RBP9.18□□□□□ -0.94
NPC1-204ENST00000586718 UBE2TQ9NPD8 197 aaPredicted RBP9.18□□□□□ -0.94
NPC1-204ENST00000586718 SLC38A7Q9NVC3 462 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 PYCARDQ9ULZ3 195 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 GIT1Q9Y2X7 761 aa9.18□□□□□ -0.94
NPC1-204ENST00000586718 BZW2Q9Y6E2 419 aaKnown RBP9.18□□□□□ -0.94
NPC1-204ENST00000586718 TDRD15B5MCY1 1934 aaKnown RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 SSU72P8A0A1W2PR75 194 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 SOWAHDA6NJG2 315 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 RNF225M0QZC1 329 aaPredicted RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 AKR1B10O60218 316 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 VNN1O95497 513 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 ASS1P00966 412 aaKnown RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 CLTBP09497 229 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 KRT5P13647 590 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 KCNE1P15382 129 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 IBSPP21815 317 aaPredicted RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 AKAP5P24588 427 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 POLR2BP30876 1174 aaKnown RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 USP8P40818 1118 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 PNPLA4P41247 253 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 PDE6CP51160 858 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 TNNC1P63316 161 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 KRT83P78385 493 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 RBP5P82980 135 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 APBA1Q02410 837 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 ARID5AQ03989 594 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 TLE2Q04725 743 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 MYO1EQ12965 1108 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 CUL2Q13617 745 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 DSC3Q14574 896 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 DRAP1Q14919 205 aaPredicted RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 SPA17Q15506 151 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 ZNF667Q5HYK9 610 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 TRAF7Q6Q0C0 670 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 TMEM139Q8IV31 216 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 TTC39CQ8N584 583 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 LRRC52Q8N7C0 313 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 C1orf127Q8N9H9 656 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 RNF169Q8NCN4 708 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 LMO3Q8TAP4 145 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
NPC1-204ENST00000586718 ZNF516Q92618 1163 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 SEMA4DQ92854 862 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 FAXDC2Q96IV6 333 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 ADAM2Q99965 735 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 MCOLN1Q9GZU1 580 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 RSAD1Q9HA92 442 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPC1-204ENST00000586718 DPP3Q9NY33 737 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 AIPL1Q9NZN9 384 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 HES2Q9Y543 173 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 TRIP11Q15643 1979 aa9.17□□□□□ -0.94
NPC1-204ENST00000586718 BRCA2P51587 3418 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 UMODL1Q5DID0 1318 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 A0A0U1RQF3 1178 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 EVI5O60447 810 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 ZNF623O75123 536 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 GFPT2O94808 682 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 NDUFA10O95299 355 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
NPC1-204ENST00000586718 CYP3A5P20815 502 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 RFC2P35250 354 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 MLH1P40692 756 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 PRKCIP41743 596 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 KIF11P52732 1056 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 SV2CQ496J9 727 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 GLRA4Q5JXX5 417 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 PHLDB3Q6NSJ2 640 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 GLB1LQ6UWU2 654 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 SCARA5Q6ZMJ2 495 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 KIAA1328Q86T90 577 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 SMG8Q8ND04 991 aaKnown RBP9.16□□□□□ -0.94
NPC1-204ENST00000586718 KIAA1524Q8TCG1 905 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 URGCPQ8TCY9 931 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 SHC3Q92529 594 aa9.16□□□□□ -0.94
NPC1-204ENST00000586718 PAWRQ96IZ0 340 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms