RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 TSPAN18Q96SJ8 248 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 TUBGCP2Q9BSJ2 902 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
DNMT1-208ENST00000586667 CWH43Q9H720 699 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-208ENST00000586667 DNAJB4Q9UDY4 337 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
DNMT1-208ENST00000586667 SCN1AP35498 2009 aa13.62□□□□□ -0.23
DNMT1-208ENST00000586667 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 ANO9A1A5B4 782 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 PMM2O15305 246 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 LRRN2O75325 713 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 THP07101 528 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 MYOGP15173 224 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 CYP3A5P20815 502 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 LRPAP1P30533 357 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 GTF2H1P32780 548 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 FMO5P49326 533 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 MXI1P50539 228 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 COPB1P53618 953 aaKnown RBP13.61□□□□□ -0.23
DNMT1-208ENST00000586667 TUSC3Q13454 348 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 TRAPPC11Q7Z392 1133 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-208ENST00000586667 ABI1Q8IZP0 508 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 TAS1R2Q8TE23 839 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 BCL7CQ8WUZ0 217 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-208ENST00000586667 FNBP1Q96RU3 617 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 YME1L1Q96TA2 773 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 XYLT2Q9H1B5 865 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 NRDE2Q9H7Z3 1164 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 TMEM8AQ9HCN3 771 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 MARCH5Q9NX47 278 aa13.61□□□□□ -0.23
DNMT1-208ENST00000586667 YBX2Q9Y2T7 364 aaKnown RBP13.61□□□□□ -0.23
DNMT1-208ENST00000586667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
DNMT1-208ENST00000586667 A0A1B0GTH6 734 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 CASTOR2A6NHX0 329 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 KIF4AO95239 1232 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 AFPP02771 609 aaKnown RBP13.6□□□□□ -0.23
DNMT1-208ENST00000586667 ITGB3P05106 788 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 ITGB1P05556 798 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 TNNI1P19237 187 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 PBX2P40425 430 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 PBX3P40426 434 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 MTIF2P46199 727 aaKnown RBP13.6□□□□□ -0.23
DNMT1-208ENST00000586667 SLC11A1P49279 550 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 MYL7Q01449 175 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 UPP1Q16831 310 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 DUOXA2Q1HG44 320 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 EPC2Q52LR7 807 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 TCERG1LQ5VWI1 586 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 C9orf57Q5W0N0 161 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 DPY19L2P1Q6NXN4 242 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 RABGGTAQ92696 567 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 SEMA4DQ92854 862 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
DNMT1-208ENST00000586667 RAD9AQ99638 391 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 SLC38A7Q9NVC3 462 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 DPP3Q9NY33 737 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-208ENST00000586667 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 COQ4Q9Y3A0 265 aa13.6□□□□□ -0.23
DNMT1-208ENST00000586667 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-208ENST00000586667 LINC01553A4QN01 128 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 GOLGA6L19H0YKK7 550 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 PIRO00625 290 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 SPTLC1O15269 473 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 TLL1O43897 1013 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 EFEMP2O95967 443 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 TMEM191BP0C7N4 346 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-208ENST00000586667 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
DNMT1-208ENST00000586667 AARSP49588 968 aaKnown RBP eCLIP13.59□□□□□ -0.23
DNMT1-208ENST00000586667 CLCNKBP51801 687 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 AP3M2P53677 418 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 FANCCQ00597 558 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 BTG3Q14201 252 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-208ENST00000586667 KRT39Q6A163 491 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 USP37Q86T82 979 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 BEST2Q8NFU1 509 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 ELMO3Q96BJ8 720 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-208ENST00000586667 VN1R3Q9BXE9 311 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 PBX4Q9BYU1 374 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 MMRN2Q9H8L6 949 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
DNMT1-208ENST00000586667 VWA8A3KMH1 1905 aa13.58□□□□□ -0.23
DNMT1-208ENST00000586667 TMEM189-UBE2V1I3L0A0 370 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 PODXLO00592 558 aa13.58□□□□□ -0.24
DNMT1-208ENST00000586667 ZC3H11AO75152 810 aaKnown RBP eCLIP13.58□□□□□ -0.24
DNMT1-208ENST00000586667 ASS1P00966 412 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms