RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 GAD1Q99259 594 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 CCDC94Q9BW85 323 aaPredicted RBP17.5■□□□□ 0.39
ATG4D-205ENST00000586477 ZBP1Q9H171 429 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 DNAJC25Q9H1X3 360 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 CXCL16Q9H2A7 254 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 UBN1Q9NPG3 1134 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 ENTPD7Q9NQZ7 604 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
ATG4D-205ENST00000586477 CD207Q9UJ71 328 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 GNA14O95837 355 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 EFEMP2O95967 443 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 NR2F2P24468 414 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 AKAP5P24588 427 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 SSTR3P32745 418 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 NDUFV1P49821 464 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 ZNF165P49910 485 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 SCNN1GP51170 649 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 MYL5Q02045 173 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 KRT17Q04695 432 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 RNASELQ05823 741 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 DSC1Q08554 894 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 SMAD4Q13485 552 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 SMAD2Q15796 467 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 DDX53Q86TM3 631 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 FAM114A1Q8IWE2 563 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 COLGALT2Q8IYK4 626 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 GJD3Q8N144 294 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 CSGALNACT2Q8N6G5 542 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 MRPL43Q8N983 215 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 SMRP1Q8NCR6 262 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 ENOX1Q8TC92 643 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 URGCPQ8TCY9 931 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 MKNK1Q9BUB5 465 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 APOL6Q9BWW8 343 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 CDT1Q9H211 546 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 NGRNQ9NPE2 291 aaKnown RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 HSPBP1Q9NZL4 362 aa17.49■□□□□ 0.39
ATG4D-205ENST00000586477 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-205ENST00000586477 C19orf67A6NJJ6 358 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 BECN2A8MW95 431 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 ANKRD63C9JTQ0 380 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 F8W810 466 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 NRP1O14786 923 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 IKBKBO14920 756 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 MAPK13O15264 365 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 EXTL3O43909 919 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 EXOC3O60645 756 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 YARSP54577 528 aaKnown RBP17.48■□□□□ 0.39
ATG4D-205ENST00000586477 ZP2Q05996 745 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 ADAM9Q13443 819 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 SPATA1Q5VX52 437 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 ANKRD40Q6AI12 368 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 TTI2Q6NXR4 508 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 TMC7Q7Z402 723 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 VPS52Q8N1B4 723 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 GPD1LQ8N335 351 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 TMEM169Q96HH4 297 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 TSPAN18Q96SJ8 248 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 CDCA3Q99618 268 aaPredicted RBP17.48■□□□□ 0.39
ATG4D-205ENST00000586477 RAPGEFL1Q9UHV5 662 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 GIT1Q9Y2X7 761 aa17.48■□□□□ 0.39
ATG4D-205ENST00000586477 ABLIM1O14639 778 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 SLC16A3O15427 465 aaKnown RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 CLTAP09496 248 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 EPB41P11171 864 aaKnown RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 PRKCSHP14314 528 aaPredicted RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 PSMC2P35998 433 aaKnown RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 GRM5P41594 1212 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 ENPEPQ07075 957 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 SMC1AQ14683 1233 aaKnown RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 SURF1Q15526 300 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 TMEM31Q5JXX7 168 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 SLC39A4Q6P5W5 647 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 SYCE2Q6PIF2 218 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 ZBTB33Q86T24 672 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 CD302Q8IX05 232 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 FAM200AQ8TCP9 573 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 CBWD1Q9BRT8 395 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 TMEM175Q9BSA9 504 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 S1PR5Q9H228 398 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 METTL14Q9HCE5 456 aaKnown RBP17.47■□□□□ 0.39
ATG4D-205ENST00000586477 DMAC2Q9NW81 257 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 KLK14Q9P0G3 267 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
ATG4D-205ENST00000586477 ZNF233A6NK53 670 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 CLIC2O15247 247 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 CXCL14O95715 111 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 CTSAP10619 480 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 HARSP12081 509 aaKnown RBP17.46■□□□□ 0.39
ATG4D-205ENST00000586477 ADSSP30520 456 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 CYP2J2P51589 502 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 LLGL2Q6P1M3 1020 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 C11orf57Q6ZUT1 292 aaPredicted RBP17.46■□□□□ 0.39
ATG4D-205ENST00000586477 TAS1R1Q7RTX1 841 aa17.46■□□□□ 0.39
ATG4D-205ENST00000586477 ZC3H3Q8IXZ2 948 aaKnown RBP17.46■□□□□ 0.39
ATG4D-205ENST00000586477 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms