RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 LILRB3O75022 631 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 PRPF6O94906 941 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 IL18RAPO95256 599 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 MYBP10242 640 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 RPL17P18621 184 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 CYP3A5P20815 502 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ARPP19P56211 112 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 KCNC3Q14003 757 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 TMEM132DQ14C87 1099 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 NAB2Q15742 525 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ENOX2Q16206 610 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 E2F4Q16254 413 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 FAM26FQ5R3K3 315 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ARMCX5Q6P1M9 558 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 PRSS55Q6UWB4 352 aaPredicted RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 HS2ST1Q7LGA3 356 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 HDAC7Q8WUI4 952 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 CACTINQ8WUQ7 758 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ZMAT2Q96NC0 199 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 FAM213AQ9BRX8 229 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 BLZF1Q9H2G9 400 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ASB7Q9H672 318 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 EXOC1Q9NV70 894 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 SERTAD1Q9UHV2 236 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
CLIP3-203ENST00000586457 ZDHHC9Q9Y397 364 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
CLIP3-203ENST00000586457 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 TTC26A0AVF1 554 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 I3L4J1 428 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 C1RP00736 705 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 PFKFB1P16118 471 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 GARTP22102 1010 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 PAX3P23760 479 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 OR1D2P34982 312 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
CLIP3-203ENST00000586457 BRCC3P46736 316 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 POU5F1Q01860 360 aaKnown RBP11.81□□□□□ -0.52
CLIP3-203ENST00000586457 ZP2Q05996 745 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 SYCE2Q6PIF2 218 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 UNC13DQ70J99 1090 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 FSIP1Q8NA03 581 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 KREMEN2Q8NCW0 462 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 LNX1Q8TBB1 728 aaPredicted RBP11.81□□□□□ -0.52
CLIP3-203ENST00000586457 PIK3R5Q8WYR1 880 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 PAGE5Q96GU1 130 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 HAPLN2Q9GZV7 340 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 S1PR5Q9H228 398 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 PCIF1Q9H4Z3 704 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 KIAA1586Q9HCI6 787 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 DERAQ9Y315 318 aa11.81□□□□□ -0.52
CLIP3-203ENST00000586457 FRMD3A2A2Y4 597 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SYN3O14994 580 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 EIF3DO15371 548 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 TGM5O43548 720 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 KIF20AO95235 890 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 MYL1P05976 194 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 WEE2P0C1S8 567 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 FGFR3P22607 806 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SP100P23497 879 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 TKTP29401 623 aaKnown RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 TFAMQ00059 246 aaKnown RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 KCNA1Q09470 495 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 PSMD2Q13200 908 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 CUL4BQ13620 913 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SURF1Q15526 300 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 CTXN3Q4LDR2 81 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 PPM1LQ5SGD2 360 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 ZBTB41Q5SVQ8 909 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 JADE1Q6IE81 842 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 CCDC149Q6ZUS6 474 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 NT5DC4Q86YG4 428 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 RNF168Q8IYW5 571 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 HPS3Q969F9 1004 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SAAL1Q96ER3 474 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 SLC39A2Q9NP94 309 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 RBAKQ9NYW8 714 aaPredicted RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 HOOK1Q9UJC3 728 aaKnown RBP11.8□□□□□ -0.52
CLIP3-203ENST00000586457 POLIQ9UNA4 740 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 CDY1Q9Y6F8 540 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 STYXL1Q9Y6J8 313 aa11.8□□□□□ -0.52
CLIP3-203ENST00000586457 XIRP2A4UGR9 3374 aa11.79□□□□□ -0.52
CLIP3-203ENST00000586457 A0A1W2PQ27 194 aa11.79□□□□□ -0.52
CLIP3-203ENST00000586457 A0A1W2PQ64 194 aa11.79□□□□□ -0.52
CLIP3-203ENST00000586457 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
CLIP3-203ENST00000586457 GOLGA8IPA6NC78 632 aa11.79□□□□□ -0.52
CLIP3-203ENST00000586457 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms