RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ARMCX2Q7L311 632 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 CALN1Q9BXU9 219 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 MAK16Q9BXY0 300 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 ERAP1Q9NZ08 941 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 NOVA2Q9UNW9 492 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 FARP2O94887 1054 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 CDH8P55286 799 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 HUNKP57058 714 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 PRAMEF19Q5SWL8 479 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 TMEM35BQ8NCS4 154 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 MRPL47Q9HD33 250 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 FAM114A2Q9NRY5 505 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 PASKQ96RG2 1323 aa13.28□□□□□ -0.28
SMARCA4-208ENST00000585799 ADCY3O60266 1144 aa13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 UAP1Q16222 522 aaPredicted RBP13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 IPO4Q8TEX9 1081 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 C18orf8Q96DM3 657 aa13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 ZIM3Q96PE6 472 aa13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 TRIM7Q9C029 511 aa13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 C2orf40Q9H1Z8 148 aa13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 NOD1Q9Y239 953 aa13.27□□□□□ -0.28
SMARCA4-208ENST00000585799 HBP1O60381 514 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 TOM1L1O75674 476 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 GRAP2O75791 330 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 GH1P01241 217 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 C10orf67Q8IYJ2 551 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 WHAMMQ8TF30 809 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 ATP8B4Q8TF62 1192 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 ARL8AQ96BM9 186 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 KIF12Q96FN5 646 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 SYNGAP1Q96PV0 1343 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 GOLGA8KD6RF30 607 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 E7EVH7 732 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 OGTO15294 1046 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 P4HA1P13674 534 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 ATF2P15336 505 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 TDRD10Q5VZ19 366 aaKnown RBP13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 EEF1DP3Q658K8 133 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 GPAT2Q6NUI2 795 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 RUFY4Q6ZNE9 571 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
SMARCA4-208ENST00000585799 ARIH2O95376 493 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ITGB3P05106 788 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 PSMA2P25787 234 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ANXA13P27216 316 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 POLR2BP30876 1174 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 CCT5P48643 541 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 RGS7P49802 495 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 YWHAEP62258 255 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ENOSF1Q7L5Y1 443 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 CPLX4Q7Z7G2 160 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ANKRD42Q8N9B4 389 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 EBAG9O00559 213 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 RGS16O15492 202 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 TBXAS1P24557 533 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 IFNAR2P48551 515 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 HNRNPH2P55795 449 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 PLCB4Q15147 1175 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 TMEM63BQ5T3F8 832 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ARFGAP2Q8N6H7 521 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 HSPH1Q92598 858 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 EXOC4Q96A65 974 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 C12orf42Q96LP6 360 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 MCEEQ96PE7 176 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 AP5M1Q9H0R1 490 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 NGRNQ9NPE2 291 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 TBK1Q9UHD2 729 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 RNF8O76064 485 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ABCD1P33897 745 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 MTMR3Q13615 1198 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
SMARCA4-208ENST00000585799 M0QYV0 167 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 LCA5LO95447 670 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 JAM2P57087 298 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SNRPFP62306 86 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 FMO1Q01740 532 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 MAP3K10Q02779 954 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 AMHR2Q16671 573 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SMTNL2Q2TAL5 461 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 KCNV1Q6PIU1 500 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 ZNF662Q6ZS27 426 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 UBA3Q8TBC4 463 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 ALG3Q92685 438 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 SENP7Q9BQF6 1050 aa13.25□□□□□ -0.29
SMARCA4-208ENST00000585799 WNT8AQ9H1J5 351 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms