RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 BEST2Q8NFU1 509 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 SLC35C1Q96A29 364 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 GAD1Q99259 594 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 POP1Q99575 1024 aaKnown RBP18.29■□□□□ 0.52
HMG20B-215ENST00000585741 TMEM8AQ9HCN3 771 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 SLC38A7Q9NVC3 462 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 CNTN3Q9P232 1028 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 DERAQ9Y315 318 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.29■□□□□ 0.52
HMG20B-215ENST00000585741 BDP1A6H8Y1 2624 aa18.29■□□□□ 0.52
HMG20B-215ENST00000585741 NCOR1O75376 2440 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 LRRC10BA6NIK2 292 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 UPP2O95045 317 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
HMG20B-215ENST00000585741 FMO5P49326 533 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 TRPC3Q13507 836 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 GLRA4Q5JXX5 417 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 KANSL3Q9P2N6 904 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
HMG20B-215ENST00000585741 C2CD2Q9Y426 696 aa18.28■□□□□ 0.52
HMG20B-215ENST00000585741 A0A1B0GTH6 734 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 ARL5CA6NH57 179 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 LGALS16A8MUM7 142 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 P4HA2O15460 535 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 ARHGEF15O94989 841 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 THP07101 528 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 NFICP08651 508 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 MRPS5P82675 430 aaKnown RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 RNASELQ05823 741 aaKnown RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 TCTN1Q2MV58 587 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 ZNF598Q86UK7 904 aaKnown RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 DRC7Q8IY82 874 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 PLEKHO2Q8TD55 490 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 HELQQ8TDG4 1101 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 ADAMTS19Q8TE59 1207 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 FAM193BQ96PV7 902 aaPredicted RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 IMPG2Q9BZV3 1241 aa18.27■□□□□ 0.52
HMG20B-215ENST00000585741 XPO4Q9C0E2 1151 aaKnown RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.52
HMG20B-215ENST00000585741 SMIM28A0A1B0GU29 152 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 EPOPA6NHQ4 379 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 KRT19P08727 400 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 KCNE1P15382 129 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 ATF7P17544 494 aaPredicted RBP18.26■□□□□ 0.51
HMG20B-215ENST00000585741 POU3F3P20264 500 aaPredicted RBP18.26■□□□□ 0.51
HMG20B-215ENST00000585741 PIK3CAP42336 1068 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 SCNN1GP51170 649 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 WDR5P61964 334 aaKnown RBP18.26■□□□□ 0.51
HMG20B-215ENST00000585741 PPP3CAQ08209 521 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 MIIPQ5JXC2 388 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.26■□□□□ 0.51
HMG20B-215ENST00000585741 GBP6Q6ZN66 633 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 RSPH1Q8WYR4 309 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 ZFP42Q96MM3 310 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
HMG20B-215ENST00000585741 MTMR12Q9C0I1 747 aa18.26■□□□□ 0.51
HMG20B-215ENST00000585741 MEIS3P2A8K0S8 358 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 RFXAPO00287 272 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 OFD1O75665 1012 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 POMCP01189 267 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 CA3P07451 260 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 FGFR1P11362 822 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 WNT7BP56706 349 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 CLDN10P78369 228 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 GRIK3Q13003 919 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 EXOC3L4Q17RC7 722 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 NOMO2Q5JPE7 1267 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 WDR44Q5JSH3 913 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 ALKAL1Q6UXT8 129 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 SV2AQ7L0J3 742 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 TRAPPC11Q7Z392 1133 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 FBXL13Q8NEE6 735 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 OR5B17Q8NGF7 314 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 ZBED2Q9BTP6 218 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
HMG20B-215ENST00000585741 TMEM117Q9H0C3 514 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 DPP3Q9NY33 737 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 TET1Q8NFU7 2136 aa18.25■□□□□ 0.51
HMG20B-215ENST00000585741 TBKBP1A7MCY6 615 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 ADCY5O95622 1261 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 BMP1P13497 986 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 CYP3A5P20815 502 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 ZNF75DP51815 510 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 NR1I3Q14994 352 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 CBWD6Q4V339 395 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 XKR4Q5GH76 650 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 CBWD3Q5JTY5 395 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 CBWD5Q5RIA9 395 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 FAM117BQ6P1L5 589 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 EFCAB13Q8IY85 973 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 RNF19AQ9NV58 838 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 ITGA11Q9UKX5 1188 aa18.24■□□□□ 0.51
HMG20B-215ENST00000585741 MTCH2Q9Y6C9 303 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms