RNA–Protein interactions for RNA: ENST00000585728.5

GFAP-206, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-206ENST00000585728 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
GFAP-206ENST00000585728 HYIQ5T013 277 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 MPZL3Q6UWV2 235 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 KCTD17Q8N5Z5 321 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 ST13P5Q8NFI4 369 aaPredicted RBP13.99□□□□□ -0.17
GFAP-206ENST00000585728 ITFG1Q8TB96 612 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 SNX27Q96L92 541 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 ZMAT2Q96NC0 199 aaKnown RBP13.99□□□□□ -0.17
GFAP-206ENST00000585728 ACAP3Q96P50 834 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 HCFC1R1Q9NWW0 138 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 DNMT3BQ9UBC3 853 aaKnown RBP13.99□□□□□ -0.17
GFAP-206ENST00000585728 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 KCNH3Q9ULD8 1083 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 ANK1P16157 1881 aa13.99□□□□□ -0.17
GFAP-206ENST00000585728 PODXLO00592 558 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 SYN3O14994 580 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 SLC16A4O15374 487 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 GUCY2CP25092 1073 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 GPC5P78333 572 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
GFAP-206ENST00000585728 PKP1Q13835 747 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 BECN1Q14457 450 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 PABPC1LQ4VXU2 614 aaKnown RBP13.98□□□□□ -0.17
GFAP-206ENST00000585728 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
GFAP-206ENST00000585728 SLC8B1Q6J4K2 584 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 ZNF461Q8TAF7 563 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 SPIRE2Q8WWL2 714 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 TCHPQ9BT92 498 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 AVENQ9NQS1 362 aaPredicted RBP13.98□□□□□ -0.17
GFAP-206ENST00000585728 DLGAP2Q9P1A6 1054 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 CNTN3Q9P232 1028 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 SIT1Q9Y3P8 196 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 FAM186AA6NE01 2351 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 CACNA1IQ9P0X4 2223 aa13.98□□□□□ -0.17
GFAP-206ENST00000585728 ARHGEF37A1IGU5 675 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 SFI1A8K8P3 1242 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 TBC1D4O60343 1298 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 ABLIM3O94929 683 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 DCNP07585 359 aaKnown RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 PLS3P13797 630 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 RPL9P32969 192 aaKnown RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 ROR1Q01973 937 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 STRN3Q13033 797 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 ZRSR1Q15695 479 aaKnown RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 FOXD4L6Q3SYB3 417 aaPredicted RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 FOXD4L3Q6VB84 417 aaPredicted RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 NPAS3Q8IXF0 933 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 SYT2Q8N9I0 419 aaPredicted RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 SHDQ96IW2 340 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 ZBTB45Q96K62 511 aaPredicted RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 PNMA5Q96PV4 448 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 ZFHX2Q9C0A1 2572 aaPredicted RBP13.97□□□□□ -0.17
GFAP-206ENST00000585728 COL4A3Q01955 1670 aa13.97□□□□□ -0.17
GFAP-206ENST00000585728 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 WDR27A2RRH5 827 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 H7C4K7 107 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 MEFVO15553 781 aaPredicted RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 TOM1L1O75674 476 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 BMP15O95972 392 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 RHOP08100 348 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 ZSCAN22P10073 491 aaPredicted RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 SMTNP53814 917 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 GRIN1Q05586 938 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 MRPL58Q14197 206 aaKnown RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 NOLC1Q14978 699 aaKnown RBP eCLIP13.96□□□□□ -0.17
GFAP-206ENST00000585728 SLC10A6Q3KNW5 377 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 SPECC1Q5M775 1068 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 TMEM161BQ8NDZ6 487 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 PJA1Q8NG27 643 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 USP28Q96RU2 1077 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 FOXQ1Q9C009 403 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 SEMA4AQ9H3S1 761 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 ZSCAN16Q9H4T2 348 aaPredicted RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 KCND2Q9NZV8 630 aa13.96□□□□□ -0.17
GFAP-206ENST00000585728 MRPS23Q9Y3D9 190 aaKnown RBP13.96□□□□□ -0.17
GFAP-206ENST00000585728 KANSL1LA0AUZ9 987 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 F13A1P00488 732 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 LRG1P02750 347 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 MAPTP10636 758 aaKnown RBP13.95□□□□□ -0.18
GFAP-206ENST00000585728 HARSP12081 509 aaKnown RBP13.95□□□□□ -0.18
GFAP-206ENST00000585728 ATF2P15336 505 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 PTPN2P17706 415 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 MARCKSP29966 332 aaPredicted RBP13.95□□□□□ -0.18
GFAP-206ENST00000585728 ELF1P32519 619 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 PFKPQ01813 784 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 PRKCQQ04759 706 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 SNW1Q13573 536 aaKnown RBP13.95□□□□□ -0.18
GFAP-206ENST00000585728 MLF2Q15773 248 aaPredicted RBP13.95□□□□□ -0.18
GFAP-206ENST00000585728 SLC5A9Q2M3M2 681 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 SLC44A4Q53GD3 710 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 ARL6IP4Q66PJ3 421 aaKnown RBP13.95□□□□□ -0.18
GFAP-206ENST00000585728 ZPBP2Q6X784 338 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 C1orf210Q8IVY1 113 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 TCEAL8Q8IYN2 117 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 ADSSL1Q8N142 457 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 ING5Q8WYH8 240 aa13.95□□□□□ -0.18
GFAP-206ENST00000585728 KCNN1Q92952 543 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms