RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 C3orf36Q3SXR2 165 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 AFMIDQ63HM1 303 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 DRC7Q8IY82 874 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 SYNE4Q8N205 404 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 ZGPATQ8N5A5 531 aaKnown RBP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 TTC8Q8TAM2 541 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 TSR2Q969E8 191 aaKnown RBP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 FAM167AQ96KS9 214 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 MRGPRX4Q96LA9 322 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 MYBBP1AQ9BQG0 1328 aaKnown RBP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 LDAHQ9H6V9 325 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 PRDM11Q9NQV5 511 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 C1orf112Q9NSG2 853 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 EIF2B4Q9UI10 523 aaKnown RBP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 PRR5-ARHGAP8B1AHC4 643 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 H3BML4 177 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 RAMP2O60895 175 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 RECQL4O94761 1208 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 SNRPA1P09661 255 aaKnown RBP5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 FTH1P19P0C7X4 201 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 DDCP20711 480 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 FPR1P21462 350 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 PTTG1IPP53801 180 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 CTXN1P60606 82 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 MTM1Q13496 603 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 EFCAB12Q6NXP0 572 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 ULK2Q8IYT8 1036 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 C3orf20Q8ND61 904 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 DIS3LQ8TF46 1054 aaKnown RBP5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 DMRTA2Q96SC8 542 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 MRI1Q9BV20 369 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 SLC23A1Q9UHI7 598 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 ACTL7AQ9Y615 435 aa5.09□□□□□ -1.59
PPP4R1-227ENST00000583988 GRXCR1A8MXD5 290 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 AP1G1O43747 822 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 GPR32O75388 356 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 MGAT1P26572 445 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 TARDBPQ13148 414 aaKnown RBP eCLIP5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 LAIR1Q6GTX8 287 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 SEM1Q6ZVN7 128 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 MRGPREQ86SM8 312 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 ZFP28Q8NHY6 868 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 RUNDC1Q96C34 613 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 TAAR9Q96RI9 348 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 PRRX2Q99811 253 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 MLST8Q9BVC4 326 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 SPON1Q9HCB6 807 aa5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 SIDT1Q9NXL6 827 aaKnown RBP5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 NOB1Q9ULX3 412 aaKnown RBP5.08□□□□□ -1.6
PPP4R1-227ENST00000583988 DRGXA6NNA5 263 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 PRPF3O43395 683 aaKnown RBP5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 CTNND1O60716 968 aaKnown RBP5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 ATP5JP18859 108 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 KRT4P19013 534 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 NR4A1P22736 598 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 ALDH1A3P47895 512 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 HK3P52790 923 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 INHBEP58166 350 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 GBX1Q14549 363 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 SMN1Q16637 294 aaKnown RBP5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 DACT2Q5SW24 774 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 Q6ZPA2 131 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 CATIPQ7Z7H3 387 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 C14orf80Q86SX3 495 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 PLXDC1Q8IUK5 500 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 SYT12Q8IV01 421 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 VRK3Q8IV63 474 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 WDR75Q8IWA0 830 aaKnown RBP5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 FAM43AQ8N2R8 423 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 NLGN4YQ8NFZ3 816 aaPredicted RBP5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 IFI44Q8TCB0 444 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 PROKR1Q8TCW9 393 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 TFAP2CQ92754 450 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 CDK5RAP3Q96JB5 506 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 CLPTM1LQ96KA5 538 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 NDC1Q9BTX1 674 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 ZNF768Q9H5H4 540 aaKnown RBP5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 ANLNQ9NQW6 1124 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 DMRT1Q9Y5R6 373 aa5.07□□□□□ -1.6
PPP4R1-227ENST00000583988 TMEM191CA6NGB0 347 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 TRIM24O15164 1050 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 ABHD16AO95870 558 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 HRGP04196 525 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 RAP2AP10114 183 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 ATF3P18847 181 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 APOBEC3AP31941 199 aaPredicted RBP5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 TLE1Q04724 770 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 UBXN2BQ14CS0 331 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 ATXN7L2Q5T6C5 722 aaPredicted RBP5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 METRNLQ641Q3 311 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 KCNV1Q6PIU1 500 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 CHST15Q7LFX5 561 aaPredicted RBP5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 SRGAP1Q7Z6B7 1085 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 DGKHQ86XP1 1220 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 DENND1CQ8IV53 801 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 IL17RDQ8NFM7 739 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 KAT5Q92993 513 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 LENG9Q96B70 501 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms