RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 TSSK4Q6SA08 328 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 ING5Q8WYH8 240 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 DNASE1L2Q92874 299 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 ELSPBP1Q96BH3 223 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 PLA2G2FQ9BZM2 168 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 POLR3FQ9H1D9 316 aaPredicted RBP9.65□□□□□ -0.86
NUP85-223ENST00000583877 ZSWIM6Q9HCJ5 1215 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 PARD6AQ9NPB6 346 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 HEBP1Q9NRV9 189 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 SNTG2Q9NY99 539 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 MTRRQ9UBK8 725 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 GMEB2Q9UKD1 530 aa9.65□□□□□ -0.86
NUP85-223ENST00000583877 MRPS23Q9Y3D9 190 aaKnown RBP9.65□□□□□ -0.86
NUP85-223ENST00000583877 TCHHQ07283 1943 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 STK36Q9NRP7 1315 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 BAHCC1Q9P281 2608 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 DCDC2BA2VCK2 349 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 LRRIQ4A6NIV6 560 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 SHISA7A6NL88 538 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 TMEM189-UBE2V1I3L0A0 370 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 MAN2B1O00754 1011 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 N4BP3O15049 544 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 LRP3O75074 770 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 CDKL5O76039 1030 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 RECQL4O94761 1208 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 RHOP08100 348 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 ADRB1P08588 477 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 XRCC6P12956 609 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP85-223ENST00000583877 TDGF1P13385 188 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 RBM25P49756 843 aaKnown RBP9.64□□□□□ -0.87
NUP85-223ENST00000583877 FOSBP53539 338 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 STK3Q13188 491 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 PPP2R5DQ14738 602 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 SLC5A9Q2M3M2 681 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 CDCA2Q69YH5 1023 aaPredicted RBP9.64□□□□□ -0.87
NUP85-223ENST00000583877 CENPQQ7L2Z9 268 aaPredicted RBP9.64□□□□□ -0.87
NUP85-223ENST00000583877 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 MCRS1Q96EZ8 462 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 IER2Q9BTL4 223 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 C2orf40Q9H1Z8 148 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 CHRDQ9H2X0 955 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 FZD8Q9H461 694 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 PDZD7Q9H5P4 517 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 RAB23Q9ULC3 237 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 PCDHA12Q9UN75 941 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 BACE2Q9Y5Z0 518 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 CYP46A1Q9Y6A2 500 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 CDY1Q9Y6F8 540 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 MYO16Q9Y6X6 1858 aa9.64□□□□□ -0.87
NUP85-223ENST00000583877 ARHGEF37A1IGU5 675 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
NUP85-223ENST00000583877 REC8O95072 547 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 PTPN2P17706 415 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 EARS2Q5JPH6 523 aaKnown RBP9.63□□□□□ -0.87
NUP85-223ENST00000583877 LAIR1Q6GTX8 287 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 TANGO2Q6ICL3 276 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 ANKS3Q6ZW76 656 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 ZBTB8OSQ8IWT0 167 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 CELF5Q8N6W0 485 aaKnown RBP9.63□□□□□ -0.87
NUP85-223ENST00000583877 MCPH1Q8NEM0 835 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 PIGOQ8TEQ8 1089 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 UROC1Q96N76 676 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 ADPGKQ9BRR6 497 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 REPIN1Q9BWE0 567 aaKnown RBP9.63□□□□□ -0.87
NUP85-223ENST00000583877 TM6SF1Q9BZW5 370 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 CXCL16Q9H2A7 254 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 OBSL1O75147 1896 aa9.63□□□□□ -0.87
NUP85-223ENST00000583877 SLC30A4O14863 429 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 EPB41L2O43491 1005 aaKnown RBP9.62□□□□□ -0.87
NUP85-223ENST00000583877 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 B3GAT3O94766 335 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 MICAL2O94851 1124 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 LRG1P02750 347 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 RETP07949 1114 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 CEBPBP17676 345 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 FCARP24071 287 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 TKTP29401 623 aaKnown RBP9.62□□□□□ -0.87
NUP85-223ENST00000583877 CCR3P51677 355 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 PRPF4BQ13523 1007 aaKnown RBP9.62□□□□□ -0.87
NUP85-223ENST00000583877 CALCRLQ16602 461 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 MAPK6Q16659 721 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 ST3GAL2Q16842 350 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 DCAF4L1Q3SXM0 396 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 PRSS36Q5K4E3 855 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 SLC8B1Q6J4K2 584 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 ZNF461Q8TAF7 563 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 NETO1Q8TDF5 533 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 IRF7Q92985 503 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 PPP1R10Q96QC0 940 aaKnown RBP9.62□□□□□ -0.87
NUP85-223ENST00000583877 TTC12Q9H892 705 aaPredicted RBP9.62□□□□□ -0.87
NUP85-223ENST00000583877 BRD9Q9H8M2 597 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 ZFP14Q9HCL3 533 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 GPRC5CQ9NQ84 441 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 TRPV5Q9NQA5 729 aa9.62□□□□□ -0.87
NUP85-223ENST00000583877 GJB4Q9NTQ9 266 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms