RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 ZNF689Q96CS4 500 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 PCMTD1Q96MG8 357 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 PPP1R10Q96QC0 940 aaKnown RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 TSPAN18Q96SJ8 248 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 CGRRF1Q99675 332 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 DERAQ9Y315 318 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 C2CD2Q9Y426 696 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 INPPL1O15357 1258 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 XPOTO43592 962 aaKnown RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 PHACTR2O75167 634 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 DDHD2O94830 711 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 TPM2P07951 284 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 MYOGP15173 224 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 GCLMP48507 274 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 GUCY2FP51841 1108 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 HTRA4P83105 476 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 UBXN1Q04323 297 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 GOLGA8FQ08AF8 430 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 GOLGA8DPQ0D2H9 430 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 FILIP1LQ4L180 1135 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 VWA3BQ502W6 1294 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 NT5DC4Q86YG4 428 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 WDR49Q8IV35 697 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 CMTR2Q8IYT2 770 aaKnown RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 TMEM130Q8N3G9 435 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 FIBCD1Q8N539 461 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 OR5B17Q8NGF7 314 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 RSPH1Q8WYR4 309 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 ANKRD36BP1Q96IX9 119 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 GOLGA2P5Q9HBQ8 144 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 DPP3Q9NY33 737 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 TUBGCP4Q9UGJ1 667 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 UBQLN1Q9UMX0 589 aaKnown RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 PTPRJQ12913 1337 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 A0A1B0GTH6 734 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 LCHNA4D1U4 455 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 LGALS16A8MUM7 142 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 CBFA2T2O43439 604 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 STX10O60499 249 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 ZC3H11AO75152 810 aaKnown RBP eCLIP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 KRT19P08727 400 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 OR1G1P47890 313 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 PPP3CAQ08209 521 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 TUSC3Q13454 348 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 BIRC3Q13489 604 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 ZBTB6Q15916 424 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 MIIPQ5JXC2 388 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 C1orf220Q5T0J3 134 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 RABGGTAQ92696 567 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 PRO3102Q9H379 93 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 NRDE2Q9H7Z3 1164 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 CACNG4Q9UBN1 327 aa11.83□□□□□ -0.52
TOP3A-216ENST00000583804 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 MRPL42Q9Y6G3 142 aaKnown RBP11.83□□□□□ -0.52
TOP3A-216ENST00000583804 B4GALT3O60512 393 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 CLSTN1O94985 981 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 ALDH2P05091 517 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 PTMAP06454 111 aaKnown RBP11.82□□□□□ -0.52
TOP3A-216ENST00000583804 CYP3A5P20815 502 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 PBX2P40425 430 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 AP3M2P53677 418 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
TOP3A-216ENST00000583804 CLDN10P78369 228 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 APBA1Q02410 837 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 SOX4Q06945 474 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-216ENST00000583804 ENPEPQ07075 957 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 NAB2Q15742 525 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 SV2AQ7L0J3 742 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 TRAPPC11Q7Z392 1133 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 COLGALT2Q8IYK4 626 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 SLC35C1Q96A29 364 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 NDST4Q9H3R1 872 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 CWH43Q9H720 699 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 RC3H2Q9HBD1 1191 aaKnown RBP11.82□□□□□ -0.52
TOP3A-216ENST00000583804 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 MSRAQ9UJ68 235 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 PRG3Q9Y2Y8 225 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-216ENST00000583804 PCDHA11Q9Y5I1 949 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 CITO14578 2027 aa11.82□□□□□ -0.52
TOP3A-216ENST00000583804 PTPRSQ13332 1948 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 NT5C1B-RDH14C9J2C7 533 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 AFPP02771 609 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 ITGB3P05106 788 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 CA3P07451 260 aa11.81□□□□□ -0.52
TOP3A-216ENST00000583804 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
TOP3A-216ENST00000583804 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms