RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 SNUPNO95149 360 aaKnown RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 CKBP12277 381 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 ANAPC15P60006 121 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 IGBP1P78318 339 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 CREMQ03060 361 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 RESTQ13127 1097 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 B3GNTL1Q67FW5 361 aaPredicted RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 PPP4R3AQ6IN85 833 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 PRR18Q8N4B5 295 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 CPA6Q8N4T0 437 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 FITM2Q8N6M3 262 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 NSUN6Q8TEA1 469 aaKnown RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 CHFRQ96EP1 664 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 MARS2Q96GW9 593 aaKnown RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 CLPTM1LQ96KA5 538 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 PRRX2Q99811 253 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 ZSWIM1Q9BR11 485 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 WDR11Q9BZH6 1224 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 IKZF4Q9H2S9 585 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 SERHL2Q9H4I8 314 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 TYW1Q9NV66 732 aaKnown RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 DDX56Q9NY93 547 aaKnown RBP4.77□□□□□ -1.65
VAPA-206ENST00000583475 CALCOCO1Q9P1Z2 691 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 ANKFY1Q9P2R3 1169 aa4.77□□□□□ -1.65
VAPA-206ENST00000583475 GRM6O15303 877 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 HLA-DOAP06340 250 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 ALAS1P13196 640 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 PDCP20941 246 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 DDX6P26196 483 aaKnown RBP eCLIP4.76□□□□□ -1.65
VAPA-206ENST00000583475 ZEB1P37275 1124 aaPredicted RBP4.76□□□□□ -1.65
VAPA-206ENST00000583475 NEK2P51955 445 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 INHBCP55103 352 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 NOMO3P69849 1222 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 OCA2Q04671 838 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 TLE1Q04724 770 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 RAB39AQ14964 217 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 NOMO2Q5JPE7 1267 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 TMEM240Q5SV17 173 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 PCSK4Q6UW60 755 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 MIER2Q8N344 545 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 IL17RDQ8NFM7 739 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 REXO4Q9GZR2 422 aaKnown RBP4.76□□□□□ -1.65
VAPA-206ENST00000583475 TCF7L1Q9HCS4 588 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 LUC7L2Q9Y383 392 aaKnown RBP4.76□□□□□ -1.65
VAPA-206ENST00000583475 CFAP20Q9Y6A4 193 aaKnown RBP4.76□□□□□ -1.65
VAPA-206ENST00000583475 AATKQ6ZMQ8 1374 aa4.76□□□□□ -1.65
VAPA-206ENST00000583475 UNC119BA6NIH7 251 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 SPDEFO95238 335 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 POU2F2P09086 479 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 PDGFRBP09619 1106 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 MTHFD1P11586 935 aaKnown RBP4.75□□□□□ -1.65
VAPA-206ENST00000583475 FGFR4P22455 802 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 GUCY1B3Q02153 619 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 SLFN5Q08AF3 891 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 SNAPC2Q13487 334 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 ATP2B3Q16720 1220 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 FLYWCH1Q4VC44 716 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 KHDC1Q4VXA5 237 aaKnown RBP4.75□□□□□ -1.65
VAPA-206ENST00000583475 PABPC1LQ4VXU2 614 aaKnown RBP4.75□□□□□ -1.65
VAPA-206ENST00000583475 MRGPRGQ86SM5 289 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 TTC7BQ86TV6 843 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 ZBTB46Q86UZ6 589 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 NLGN4YQ8NFZ3 816 aaPredicted RBP4.75□□□□□ -1.65
VAPA-206ENST00000583475 TBC1D15Q8TC07 691 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 NUP133Q8WUM0 1156 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 NACC2Q96BF6 587 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 BOD1Q96IK1 185 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 CEP89Q96ST8 783 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 VRK1Q99986 396 aaPredicted RBP4.75□□□□□ -1.65
VAPA-206ENST00000583475 TTPALQ9BTX7 342 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 RNPEPQ9H4A4 650 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
VAPA-206ENST00000583475 A0A087X1B8 175 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 PIPSLA2A3N6 862 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 GRID2IPA4D2P6 1211 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 CDHR4A6H8M9 788 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 TMEM191CA6NGB0 347 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 SLC43A1O75387 559 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 ALDH1L1O75891 902 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 RPLP2P05387 115 aaKnown RBP4.74□□□□□ -1.65
VAPA-206ENST00000583475 MALP21145 153 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 HSD11B2P80365 405 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 SCAPQ12770 1279 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 TP53BP2Q13625 1128 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 UTP14CQ5TAP6 766 aaKnown RBP4.74□□□□□ -1.65
VAPA-206ENST00000583475 GADL1Q6ZQY3 521 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 Q8NA96 180 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 FUBP1Q96AE4 644 aaKnown RBP4.74□□□□□ -1.65
VAPA-206ENST00000583475 HOOK2Q96ED9 719 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 HSPBAP1Q96EW2 488 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 TMEM74BQ9NUR3 256 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 SYBUQ9NX95 663 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 VSX1Q9NZR4 365 aaPredicted RBP4.74□□□□□ -1.65
VAPA-206ENST00000583475 HSFX1Q9UBD0 423 aa4.74□□□□□ -1.65
VAPA-206ENST00000583475 WDR33Q9C0J8 1336 aaKnown RBP4.73□□□□□ -1.65
VAPA-206ENST00000583475 NISCHQ9Y2I1 1504 aa4.73□□□□□ -1.65
VAPA-206ENST00000583475 LRRC14BA6NHZ5 514 aa4.73□□□□□ -1.65
VAPA-206ENST00000583475 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms