RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 L1TD1Q5T7N2 865 aaKnown RBP27.12■■□□□ 1.93
TSEN54-209ENST00000583454 KIAA0319Q5VV43 1072 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 KRBA2Q6ZNG9 492 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 IPO9Q96P70 1041 aaKnown RBP27.12■■□□□ 1.93
TSEN54-209ENST00000583454 RPS6KC1Q96S38 1066 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 PHOX2BQ99453 314 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 CCDC94Q9BW85 323 aaPredicted RBP27.12■■□□□ 1.93
TSEN54-209ENST00000583454 EMILIN2Q9BXX0 1053 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 CXCL16Q9H2A7 254 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 MRPL17Q9NRX2 175 aaKnown RBP27.12■■□□□ 1.93
TSEN54-209ENST00000583454 STYXL1Q9Y6J8 313 aa27.12■■□□□ 1.93
TSEN54-209ENST00000583454 PTGESO14684 152 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 ASGR2P07307 311 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 KLRC2P26717 231 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 OR1G1P47890 313 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 KCNA1Q09470 495 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 XKR4Q5GH76 650 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 ALKAL1Q6UXT8 129 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 FMR1NBQ8N0W7 255 aaPredicted RBP27.11■■□□□ 1.93
TSEN54-209ENST00000583454 TDRD5Q8NAT2 981 aaKnown RBP27.11■■□□□ 1.93
TSEN54-209ENST00000583454 ENGASEQ8NFI3 743 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 HPS3Q969F9 1004 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 ACCSQ96QU6 501 aa27.11■■□□□ 1.93
TSEN54-209ENST00000583454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.1■■□□□ 1.93
TSEN54-209ENST00000583454 A0A0B4J269 797 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 ANKRD63C9JTQ0 380 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 C2CD2LO14523 706 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 KLRC4O43908 158 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 GRIK3Q13003 919 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 MTMR3Q13615 1198 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 UBALD2Q8IYN6 164 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 ACAP3Q96P50 834 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 RXFP1Q9HBX9 757 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 EXOC7Q9UPT5 735 aa27.1■■□□□ 1.93
TSEN54-209ENST00000583454 TEX28O15482 410 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 FAM189A1O60320 539 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 URODP06132 367 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 HARSP12081 509 aaKnown RBP27.09■■□□□ 1.93
TSEN54-209ENST00000583454 OSTNP61366 133 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 SNW1Q13573 536 aaKnown RBP27.09■■□□□ 1.93
TSEN54-209ENST00000583454 FAM26FQ5R3K3 315 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 EPM2AIP1Q7L775 607 aaPredicted RBP27.09■■□□□ 1.93
TSEN54-209ENST00000583454 GLIS3Q8NEA6 775 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 IKZF4Q9H2S9 585 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 CHST7Q9NS84 486 aa27.09■■□□□ 1.93
TSEN54-209ENST00000583454 WDR87Q6ZQQ6 2873 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 MEFVO15553 781 aaPredicted RBP27.08■■□□□ 1.93
TSEN54-209ENST00000583454 CLTAP09496 248 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 AVPR2P30518 371 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 MATR3P43243 847 aaKnown RBP eCLIP27.08■■□□□ 1.93
TSEN54-209ENST00000583454 GLUD2P49448 558 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 YARSP54577 528 aaKnown RBP27.08■■□□□ 1.93
TSEN54-209ENST00000583454 DSG1Q02413 1049 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 NAB2Q15742 525 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 KYAT1Q16773 422 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 SLFN12LQ6IEE8 588 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 C15orf39Q6ZRI6 1047 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 STXBP4Q6ZWJ1 553 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 CMASQ8NFW8 434 aaPredicted RBP27.08■■□□□ 1.93
TSEN54-209ENST00000583454 TOPORSQ9NS56 1045 aaPredicted RBP27.08■■□□□ 1.93
TSEN54-209ENST00000583454 LIMD1Q9UGP4 676 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 VWA8A3KMH1 1905 aa27.08■■□□□ 1.93
TSEN54-209ENST00000583454 ZFHX2Q9C0A1 2572 aaPredicted RBP27.07■■□□□ 1.92
TSEN54-209ENST00000583454 CFAP54Q96N23 3096 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 TISP43B9A030 160 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 OGTO15294 1046 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 EIF3DO15371 548 aaKnown RBP eCLIP27.07■■□□□ 1.92
TSEN54-209ENST00000583454 PRPF6O94906 941 aaKnown RBP27.07■■□□□ 1.92
TSEN54-209ENST00000583454 THP07101 528 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 PTPN5P54829 565 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 FAM160A1Q05DH4 1040 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 SEZ6Q53EL9 994 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 ZNF507Q8TCN5 953 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 SNX27Q96L92 541 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 PRRX2Q99811 253 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 GPR62Q9BZJ7 368 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 TMEM206Q9H813 350 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 MAN1C1Q9NR34 630 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 DOCK6Q96HP0 2047 aa27.07■■□□□ 1.92
TSEN54-209ENST00000583454 PAPLNO95428 1278 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 ADSSP30520 456 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 HOXD13P35453 343 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 SLC10A6Q3KNW5 377 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 PLCD3Q8N3E9 789 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 B3GALT6Q96L58 329 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 PPP1R10Q96QC0 940 aaKnown RBP27.06■■□□□ 1.92
TSEN54-209ENST00000583454 MSTO1Q9BUK6 570 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 CACNG4Q9UBN1 327 aa27.06■■□□□ 1.92
TSEN54-209ENST00000583454 SMIM28A0A1B0GU29 152 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 GADD45BO75293 160 aaPredicted RBP27.05■■□□□ 1.92
TSEN54-209ENST00000583454 ADH1AP07327 375 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 KCNE1P15382 129 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 DPYDQ12882 1025 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 TUSC3Q13454 348 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 POSTNQ15063 836 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 FUT10Q6P4F1 479 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 CCDC149Q6ZUS6 474 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 CNTN3Q9P232 1028 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 SSX2IPQ9Y2D8 614 aa27.05■■□□□ 1.92
TSEN54-209ENST00000583454 N4BP1O75113 896 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms