RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 PSMD6Q15008 389 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 PTPROQ16827 1216 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 CHST7Q9NS84 486 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 ADAM28Q9UKQ2 775 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 STXBP5LQ9Y2K9 1186 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 PRRC2BQ5JSZ5 2229 aaKnown RBP23.45■■□□□ 1.35
TSEN54-208ENST00000583173 PODXLO00592 558 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 MAPK13O15264 365 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 CLDN10P78369 228 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 ADAM9Q13443 819 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 SURF1Q15526 300 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 SCARA3Q6AZY7 606 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 PDE12Q6L8Q7 609 aaKnown RBP23.45■■□□□ 1.34
TSEN54-208ENST00000583173 BORCS6Q96GS4 357 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 DUSP9Q99956 384 aaKnown RBP23.45■■□□□ 1.34
TSEN54-208ENST00000583173 ZBP1Q9H171 429 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 STK39Q9UEW8 545 aa23.45■■□□□ 1.34
TSEN54-208ENST00000583173 PIRO00625 290 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 TADA2AO75478 443 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 FOSL2P15408 326 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 IGFBP4P22692 258 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 NR2F2P24468 414 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 RPL13P26373 211 aaKnown RBP23.44■■□□□ 1.34
TSEN54-208ENST00000583173 TTI2Q6NXR4 508 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 VPS52Q8N1B4 723 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 BEST2Q8NFU1 509 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 PARD3BQ8TEW8 1205 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 ZNF516Q92618 1163 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 MED15Q96RN5 788 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 TLR9Q9NR96 1032 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 DPP3Q9NY33 737 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 IRAK3Q9Y616 596 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 ANK1P16157 1881 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 PLXNA4Q9HCM2 1894 aa23.44■■□□□ 1.34
TSEN54-208ENST00000583173 PTPRJQ12913 1337 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 PSMA7O14818 248 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 PPEF2O14830 753 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 XPOTO43592 962 aaKnown RBP23.43■■□□□ 1.34
TSEN54-208ENST00000583173 AKAP3O75969 853 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 B3GAT3O94766 335 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 SOD2P04179 222 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 CTSAP10619 480 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 LRRC63Q05C16 580 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 KIAA0319Q5VV43 1072 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 C9orf57Q5W0N0 161 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 FUT10Q6P4F1 479 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 MRPL43Q8N983 215 aaKnown RBP23.43■■□□□ 1.34
TSEN54-208ENST00000583173 MLKLQ8NB16 471 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 NOC3LQ8WTT2 800 aaKnown RBP23.43■■□□□ 1.34
TSEN54-208ENST00000583173 FAM84AQ96KN4 292 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 POP1Q99575 1024 aaKnown RBP23.43■■□□□ 1.34
TSEN54-208ENST00000583173 HERC2P3Q9BVR0 1158 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 NGRNQ9NPE2 291 aaKnown RBP23.43■■□□□ 1.34
TSEN54-208ENST00000583173 INTS13Q9NVM9 706 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 TMEM63CQ9P1W3 806 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 PCDHGC5Q9Y5F6 944 aa23.43■■□□□ 1.34
TSEN54-208ENST00000583173 PDCD11Q14690 1871 aaKnown RBP23.43■■□□□ 1.34
TSEN54-208ENST00000583173 TRIM49BA6NDI0 452 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 AARSP49588 968 aaKnown RBP eCLIP23.42■■□□□ 1.34
TSEN54-208ENST00000583173 FKBP3Q00688 224 aaKnown RBP23.42■■□□□ 1.34
TSEN54-208ENST00000583173 STIM1Q13586 685 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 C1orf220Q5T0J3 134 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 GPR65Q8IYL9 337 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 C1orf127Q8N9H9 656 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 OR5B17Q8NGF7 314 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 CACTINQ8WUQ7 758 aaKnown RBP23.42■■□□□ 1.34
TSEN54-208ENST00000583173 NELFBQ8WX92 580 aa23.42■■□□□ 1.34
TSEN54-208ENST00000583173 COL4A4P53420 1690 aaPredicted RBP23.41■■□□□ 1.34
TSEN54-208ENST00000583173 C2orf71A6NGG8 1288 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 CXCL14O95715 111 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 NLRP12P59046 1061 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 DSG1Q02413 1049 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 ENPEPQ07075 957 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 WDR49Q8IV35 697 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 TMC2Q8TDI7 906 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 HASPINQ8TF76 798 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 TCF25Q9BQ70 676 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 MKNK1Q9BUB5 465 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 SIX4Q9UIU6 781 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 REV3LO60673 3130 aa23.41■■□□□ 1.34
TSEN54-208ENST00000583173 HIDE1A8MVS5 230 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 CETN3O15182 167 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 FGFR3P22607 806 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 PSMC2P35998 433 aaKnown RBP23.4■■□□□ 1.34
TSEN54-208ENST00000583173 BRCC3P46736 316 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 LILRA4P59901 499 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 TFAMQ00059 246 aaKnown RBP23.4■■□□□ 1.34
TSEN54-208ENST00000583173 DUOXA2Q1HG44 320 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 TIGD5Q53EQ6 642 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 CCDC183Q5T5S1 534 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 CEP135Q66GS9 1140 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 LMBRD2Q68DH5 695 aaPredicted RBP23.4■■□□□ 1.34
TSEN54-208ENST00000583173 KLHL10Q6JEL2 608 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 TMC7Q7Z402 723 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 ADGRD2Q7Z7M1 963 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 CCDC127Q96BQ5 260 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 CGRRF1Q99675 332 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 TSG101Q99816 390 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 FRMD4BQ9Y2L6 1034 aa23.4■■□□□ 1.34
TSEN54-208ENST00000583173 SF3B1O75533 1304 aaKnown RBP eCLIP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms