RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ADSSP30520 456 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 RPL9P32969 192 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 SMAD4Q13485 552 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 KCNC3Q14003 757 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 RTP2Q5QGT7 225 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 ANKRD54Q6NXT1 300 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 TMEM184AQ6ZMB5 413 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 PPFIBP1Q86W92 1011 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 CD302Q8IX05 232 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 C3orf58Q8NDZ4 430 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 NECAB3Q96P71 396 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 FAM213AQ9BRX8 229 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 TTPALQ9BTX7 342 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 APOL5Q9BWW9 433 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 PCIF1Q9H4Z3 704 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 UBE4BO95155 1302 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 GOLGA8IPA6NC78 632 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 GOLGA8JA6NMD2 632 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 I3L4J1 428 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 TEX28O15482 410 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 ZNF202O95125 648 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 LDHAP00338 332 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 MYL1P05976 194 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 BRCC3P46736 316 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 CREMQ03060 361 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 EHHADHQ08426 723 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 JADE1Q6IE81 842 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 EPM2AIP1Q7L775 607 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 NELFCDQ8IXH7 590 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 TMEM130Q8N3G9 435 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 SLC22A17Q8WUG5 538 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 CBWD1Q9BRT8 395 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 PDCD11Q14690 1871 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-218ENST00000582955 KLRC4O43908 158 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 ADRB2P07550 413 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 NFICP08651 508 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 HOXB8P17481 243 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 RPL17P18621 184 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 CYP3A5P20815 502 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 MCM4P33991 863 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 CLCN4P51793 760 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 GUCY2FP51841 1108 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 TMEM132DQ14C87 1099 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 PSMD5Q16401 504 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 KMT5BQ4FZB7 885 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 CRELD2Q6UXH1 353 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 ZSWIM2Q8NEG5 633 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 SCFD1Q8WVM8 642 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 PIK3R5Q8WYR1 880 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 FBXL18Q96ME1 805 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 TSPAN18Q96SJ8 248 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 ASB7Q9H672 318 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 DZANK1Q9NVP4 752 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 RBAKQ9NYW8 714 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 USP15Q9Y4E8 981 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-218ENST00000582955 EXTL3O43909 919 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 IL18RAPO95256 599 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 GLUD1P00367 558 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 FGFR3P22607 806 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 TKTP29401 623 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 LRPAP1P30533 357 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 HOXD13P35453 343 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 SMAD2Q15796 467 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 ZBTB6Q15916 424 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 RARS2Q5T160 578 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 SPATA1Q5VX52 437 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 ELMSAN1Q6PJG2 1045 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 CD300LGQ6UXG3 332 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 HS2ST1Q7LGA3 356 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 GPD1LQ8N335 351 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 LNX1Q8TBB1 728 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 FNIP2Q9P278 1114 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 DERAQ9Y315 318 aa13.67□□□□□ -0.22
SMARCE1-218ENST00000582955 KIAA0391O15091 583 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 CLIC2O15247 247 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms