RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 RETP07949 1114 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EIF4BP23588 611 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RPS9P46781 194 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DPYDQ12882 1025 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TARBP2Q15633 366 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 COBLL1Q53SF7 1204 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RINT1Q6NUQ1 792 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CAVIN1Q6NZI2 390 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FOXR2Q6PJQ5 311 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PRR23CQ6ZRP0 262 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 C1orf186Q6ZWK4 172 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GPBP1Q86WP2 473 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MLKLQ8NB16 471 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 HDAC7Q8WUI4 952 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 BCL7CQ8WUZ0 217 aaPredicted RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SMG7Q92540 1137 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DDX12PQ92771 950 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 HVCN1Q96D96 273 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NTPCRQ9BSD7 190 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PANK2Q9BZ23 570 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DHX33Q9H6R0 707 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PARVGQ9HBI0 331 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 LTB4R2Q9NPC1 389 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MRPL17Q9NRX2 175 aaKnown RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SSX2IPQ9Y2D8 614 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 UBE4BO95155 1302 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SPAG17Q6Q759 2223 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 A0A087X0B3 334 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IGKV6-21A0A0C4DH24 114 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FRMD3A2A2Y4 597 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FAM170BA6NMN3 283 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZBTB42B2RXF5 422 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZNF862O60290 1169 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 LILRB3O75022 631 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RHOBTB3O94955 611 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FAM13AO94988 1023 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 STBD1O95210 358 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GLUD1P00367 558 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 C1RP00736 705 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RPN1P04843 607 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 KCNA4P22459 653 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZNF131P52739 623 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EFNA5P52803 228 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NRLP54845 237 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GPC5P78333 572 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ASIC1P78348 528 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PFKPQ01813 784 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DMP1Q13316 513 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MCM6Q14566 821 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CSRP2Q16527 193 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZBTB41Q5SVQ8 909 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZNF658Q5TYW1 1059 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IL31Q6EBC2 164 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GLB1LQ6UWU2 654 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GET4Q7L5D6 327 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CELF5Q8N6W0 485 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GOLGA5Q8TBA6 731 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PIGOQ8TEQ8 1089 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SPIRE2Q8WWL2 714 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PSPC1Q8WXF1 523 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CLDN23Q96B33 292 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MAP7D2Q96T17 732 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NELL2Q99435 816 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 VN1R3Q9BXE9 311 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 INO80BQ9C086 356 aaPredicted RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 C2orf40Q9H1Z8 148 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ST6GALNAC4Q9H4F1 302 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NRDE2Q9H7Z3 1164 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PIDD1Q9HB75 910 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SEMA4GQ9NTN9 838 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EXOC1Q9NV70 894 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TBC1D13Q9NVG8 400 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ANO10Q9NW15 660 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CGNQ9P2M7 1197 aaKnown RBP9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PDCD11Q14690 1871 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GCN1Q92616 2671 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IGF2RP11717 2491 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EIF3DO15371 548 aaKnown RBP eCLIP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 URODP06132 367 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SKIP12755 728 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PLS3P13797 630 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ATP4AP20648 1035 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NAMPTP43490 491 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 AFMP43652 599 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 LIMK1P53667 647 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NLRP11P59045 1033 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RNASELQ05823 741 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NCBP1Q09161 790 aaKnown RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PPP2R5DQ14738 602 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EMC2Q15006 297 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ECM1Q16610 540 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 STX1AQ16623 288 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 UGCGQ16739 394 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MTERF2Q49AM1 385 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SLC44A4Q53GD3 710 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NOMO2Q5JPE7 1267 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 N4BP2L1Q5TBK1 243 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms