RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 SF3A2Q15428 464 aaKnown RBP8.44□□□□□ -1.06
CCDC47-205ENST00000582331 AMHR2Q16671 573 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 SLC5A9Q2M3M2 681 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 XKR9Q5GH70 373 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 FAM78AQ5JUQ0 283 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 HEATR6Q6AI08 1181 aaKnown RBP8.44□□□□□ -1.06
CCDC47-205ENST00000582331 SLC27A1Q6PCB7 646 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-205ENST00000582331 CDR2LQ86X02 465 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-205ENST00000582331 MAP4K3Q8IVH8 894 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 C4orf19Q8IY42 314 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 SPEM1Q8N4L4 309 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 MTRQ99707 1265 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 VPS54Q9P1Q0 977 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 WRAP73Q9P2S5 460 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-205ENST00000582331 DDX25Q9UHL0 483 aaKnown RBP8.44□□□□□ -1.06
CCDC47-205ENST00000582331 PIAS3Q9Y6X2 628 aa8.44□□□□□ -1.06
CCDC47-205ENST00000582331 RALGAPA1Q6GYQ0 2036 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 NOTCH4Q99466 2003 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 A0A1B0GUA9 196 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ZNF197O14709 1029 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ZNF263O14978 683 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 B4GALT5O43286 388 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 KCNK5O95279 499 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 PAPSS2O95340 614 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-205ENST00000582331 LRG1P02750 347 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 THP07101 528 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ZNF806P0C7X5 589 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 PSMC3P17980 439 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 FGFR3P22607 806 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 CCNE1P24864 410 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ELF1P32519 619 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 PTGDRQ13258 359 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 GAS6Q14393 721 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 EPHA7Q15375 998 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ADCK5Q3MIX3 580 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 MOXD1Q6UVY6 613 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 VITQ6UXI7 678 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 UNQ6494/PRO21346Q6UXR6 183 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 FAM20AQ96MK3 541 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ASB16Q96NS5 453 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 CORO1BQ9BR76 489 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 SLC26A6Q9BXS9 759 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 RNF26Q9BY78 433 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-205ENST00000582331 BACH2Q9BYV9 841 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ARRDC1-AS1Q9H2J1 176 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 SH3GLB2Q9NR46 395 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 MTRRQ9UBK8 725 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 VAV3Q9UKW4 847 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ZMIZ1Q9ULJ6 1067 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 PCDHA4Q9UN74 947 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 CDY1Q9Y6F8 540 aa8.43□□□□□ -1.06
CCDC47-205ENST00000582331 ARHGEF37A1IGU5 675 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 K7ESF4 209 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 PRRG1O14668 218 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 ZBTB39O15060 712 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 MICAL2O94851 1124 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 HMGB1P09429 215 aaKnown RBP8.42□□□□□ -1.06
CCDC47-205ENST00000582331 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 MLLT6P55198 1093 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-205ENST00000582331 CAPSQ13938 189 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 KRT32Q14532 448 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 CCDC6Q16204 474 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 NTRK3Q16288 839 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 PRSS36Q5K4E3 855 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 CYP4A22Q5TCH4 519 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 C1orf228Q6PIY5 440 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 Q6ZUG5 572 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 PDZD4Q76G19 769 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-205ENST00000582331 WDR5BQ86VZ2 330 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 KDF1Q8NAX2 398 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-205ENST00000582331 ZNF461Q8TAF7 563 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 CSGALNACT1Q8TDX6 532 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 DEPDC1BQ8WUY9 529 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 SMARCD2Q92925 531 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 TCEAL4Q96EI5 215 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 MSANTD3Q96H12 275 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 LOXL4Q96JB6 756 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 LXNQ9BS40 222 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 LSM14BQ9BX40 385 aaKnown RBP8.42□□□□□ -1.06
CCDC47-205ENST00000582331 NFKBIZQ9BYH8 718 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 ZSWIM4Q9H7M6 989 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 XPNPEP1Q9NQW7 623 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 RXFP3Q9NSD7 469 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 RGL1Q9NZL6 768 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 BACE2Q9Y5Z0 518 aa8.42□□□□□ -1.06
CCDC47-205ENST00000582331 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 ATRXP46100 2492 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 WDR27A2RRH5 827 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 NRG2O14511 850 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-205ENST00000582331 PTGESO14684 152 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 TRAPPC3O43617 180 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 SLC37A4O43826 429 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 MARCH6O60337 910 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 B3GAT3O94766 335 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 IFNAR1P17181 557 aa8.41□□□□□ -1.06
CCDC47-205ENST00000582331 HOXA6P31267 233 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms