RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 LRFN3Q9BTN0 628 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 STRA6Q9BX79 667 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 CUEDC2Q9H467 287 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 PANK4Q9NVE7 773 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 C2orf16Q68DN1 1984 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 FRMD3A2A2Y4 597 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 LACTBL1A8MY62 500 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 RFPL2O75678 378 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 TKTP29401 623 aaKnown RBP21.23■□□□□ 0.99
SREBF1-220ENST00000581707 ME1P48163 572 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 E2F4Q16254 413 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 CYP26C1Q6V0L0 522 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 IQUBQ8NA54 791 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 KREMEN2Q8NCW0 462 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 STAMQ92783 540 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 DHX58Q96C10 678 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 KIF12Q96FN5 646 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 LRRC27Q9C0I9 530 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 TNMDQ9H2S6 317 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 OLFML3Q9NRN5 406 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 KBTBD4Q9NVX7 518 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 TUBGCP4Q9UGJ1 667 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 PCDHA7Q9UN72 937 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 NUB1Q9Y5A7 615 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 PCDHB13Q9Y5F0 798 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.23■□□□□ 0.99
SREBF1-220ENST00000581707 STYXL1Q9Y6J8 313 aa21.23■□□□□ 0.99
SREBF1-220ENST00000581707 C2CD4DB7Z1M9 353 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 TISP43B9A030 160 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 ADAM12O43184 909 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 GCNT3O95395 438 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 ADRB2P07550 413 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 ZBTB6Q15916 424 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 ADALQ6DHV7 355 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 ANKS3Q6ZW76 656 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 CCDC65Q8IXS2 484 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 FAM212AQ96EL1 285 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 ACCSQ96QU6 501 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 TSPAN18Q96SJ8 248 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 RHOBTB2Q9BYZ6 727 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 IKZF4Q9H2S9 585 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 MTRRQ9UBK8 725 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 CPSF3Q9UKF6 684 aaKnown RBP21.22■□□□□ 0.99
SREBF1-220ENST00000581707 RCOR1Q9UKL0 485 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 AGO2Q9UKV8 859 aaKnown RBP21.22■□□□□ 0.99
SREBF1-220ENST00000581707 EXOC7Q9UPT5 735 aa21.22■□□□□ 0.99
SREBF1-220ENST00000581707 MYO10Q9HD67 2058 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 CYP3A5P20815 502 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 OR1D2P34982 312 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 ACOT2P49753 483 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 AMPD3Q01432 767 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 KCNA1Q09470 495 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 ALCAMQ13740 583 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 L1TD1Q5T7N2 865 aaKnown RBP21.21■□□□□ 0.99
SREBF1-220ENST00000581707 CD302Q8IX05 232 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 SMG7Q92540 1137 aaKnown RBP21.21■□□□□ 0.99
SREBF1-220ENST00000581707 EDAQ92838 391 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 ZDHHC7Q9NXF8 308 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 UBQLN1Q9UMX0 589 aaKnown RBP21.21■□□□□ 0.99
SREBF1-220ENST00000581707 USTQ9Y2C2 406 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 BACE2Q9Y5Z0 518 aa21.21■□□□□ 0.99
SREBF1-220ENST00000581707 DENND4AQ7Z401 1863 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 SYN3O14994 580 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 POLR2DO15514 142 aaKnown RBP21.2■□□□□ 0.98
SREBF1-220ENST00000581707 XPOTO43592 962 aaKnown RBP21.2■□□□□ 0.98
SREBF1-220ENST00000581707 PAPLNO95428 1278 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 COL9A1P20849 921 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 LRPAP1P30533 357 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 CASP5P51878 434 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 RAB33AQ14088 237 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 POSTNQ15063 836 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 CCDC149Q6ZUS6 474 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 TDRD5Q8NAT2 981 aaKnown RBP21.2■□□□□ 0.98
SREBF1-220ENST00000581707 POMGNT1Q8WZA1 660 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 SUSD3Q96L08 255 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 FAM13BQ9NYF5 915 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 FBXW11Q9UKB1 542 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 CDY1Q9Y6F8 540 aa21.2■□□□□ 0.98
SREBF1-220ENST00000581707 PRR33A8MZF0 331 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ZMYND10O75800 440 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ADSSP30520 456 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 MCM4P33991 863 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ZXDAP98168 799 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 VARS2Q5ST30 1063 aaKnown RBP21.19■□□□□ 0.98
SREBF1-220ENST00000581707 RESP18Q5W5W9 173 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 JADE1Q6IE81 842 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 RSPO2Q6UXX9 243 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-220ENST00000581707 OTOP3Q7RTS5 596 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ZDHHC14Q8IZN3 488 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 SYCP3Q8IZU3 236 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 PLCD3Q8N3E9 789 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 TMEM130Q8N3G9 435 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ZNF707Q96C28 371 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ACSF2Q96CM8 615 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-220ENST00000581707 PRKD2Q9BZL6 878 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 TRIM9Q9C026 710 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 PIDD1Q9HB75 910 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 ZDHHC9Q9Y397 364 aa21.19■□□□□ 0.98
SREBF1-220ENST00000581707 GUCY2FP51841 1108 aa21.18■□□□□ 0.98
SREBF1-220ENST00000581707 PTPN21Q16825 1174 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms