RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 SKA1Q96BD8 255 aa7.84□□□□□ -1.16
CMTM4-205ENST00000581487 SEC16BQ96JE7 1060 aa7.84□□□□□ -1.16
CMTM4-205ENST00000581487 TGS1Q96RS0 853 aaKnown RBP7.84□□□□□ -1.16
CMTM4-205ENST00000581487 PRMT1Q99873 361 aaKnown RBP7.84□□□□□ -1.16
CMTM4-205ENST00000581487 PIDD1Q9HB75 910 aa7.84□□□□□ -1.16
CMTM4-205ENST00000581487 DCP1AQ9NPI6 582 aaPredicted RBP7.84□□□□□ -1.16
CMTM4-205ENST00000581487 XDHP47989 1333 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ADCY6O43306 1168 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MAPK4P31152 587 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 RARS2Q5T160 578 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ANKRD40Q6AI12 368 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 TTC23LQ6PF05 361 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 RHOT2Q8IXI1 618 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ELOA2Q8IYF1 753 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MOSPD2Q8NHP6 518 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ZNF483Q8TF39 744 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PBXIP1Q96AQ6 731 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MAGEB10Q96LZ2 347 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 OSBPL6Q9BZF3 934 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DIS3Q9Y2L1 958 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MRPL11Q9Y3B7 192 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PTPRMP28827 1452 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 CHEK2O96017 543 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 SRGNP10124 158 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PLIN5Q00G26 463 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PTK2Q05397 1052 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 GRM4Q14833 912 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PTPAQ15257 358 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 SH2D3CQ8N5H7 860 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 CCT8L2Q96SF2 557 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 BBS2Q9BXC9 721 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 EDEM3Q9BZQ6 932 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 UNC45AQ9H3U1 944 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 HPS4Q9NQG7 708 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 BSDC1Q9NW68 430 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 RPH3AQ9Y2J0 694 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 LEMD3Q9Y2U8 911 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 HAUS5O94927 633 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 YWHAGP61981 247 aaKnown RBP eCLIP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 YWHAZP63104 245 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 UBXN2AP68543 259 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 NMD3Q96D46 503 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 SNX25Q9H3E2 840 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 TAF1DQ9H5J8 278 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 UBE2TQ9NPD8 197 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PDP2Q9P2J9 529 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DNAJC12Q9UKB3 198 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 COQ6Q9Y2Z9 468 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 UTYO14607 1347 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MIF4GDA9UHW6 222 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ATP12AP54707 1039 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 NCALDP61601 193 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 COASYQ13057 564 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 TRIM25Q14258 630 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 HADHQ16836 314 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ARMC6Q6NXE6 501 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 UBE2Q1Q7Z7E8 422 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 COMMD2Q86X83 199 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DEPTORQ8TB45 409 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 CCDC17Q96LX7 622 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 BHMT2Q9H2M3 363 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PCIF1Q9H4Z3 704 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DKK3Q9UBP4 350 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 KCNG1Q9UIX4 513 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 CHD1O14646 1710 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 PJA2O43164 708 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DYNC1LI2O43237 492 aaPredicted RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MDH1P40925 334 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 LIG4P49917 911 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 ARPP19P56211 112 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 LRRC70Q7Z2Q7 622 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 NLRX1Q86UT6 975 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 MIEF2Q96C03 454 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
CMTM4-205ENST00000581487 DBR1Q9UK59 544 aaKnown RBP7.83□□□□□ -1.16
CMTM4-205ENST00000581487 TRIM38O00635 465 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 STAM2O75886 525 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 RECQLP46063 649 aaPredicted RBP7.82□□□□□ -1.16
CMTM4-205ENST00000581487 CDK8P49336 464 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 NSUN2Q08J23 767 aaKnown RBP eCLIP7.82□□□□□ -1.16
CMTM4-205ENST00000581487 LBRQ14739 615 aaKnown RBP7.82□□□□□ -1.16
CMTM4-205ENST00000581487 ANO4Q32M45 955 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 LMBRD2Q68DH5 695 aaPredicted RBP7.82□□□□□ -1.16
CMTM4-205ENST00000581487 SFR1Q86XK3 245 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 SUGP1Q8IWZ8 645 aaKnown RBP7.82□□□□□ -1.16
CMTM4-205ENST00000581487 KIF2BQ8N4N8 673 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 CATSPER2Q96P56 530 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 SMAD5Q99717 465 aaKnown RBP7.82□□□□□ -1.16
CMTM4-205ENST00000581487 OVOS2A0A0J9YW53 1432 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 OVOS2Q6IE36 1432 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 SYNJ2BP-COX16A0A087WUM0 186 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 A0A087X0T9 212 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 SPDYE5A6NIY4 337 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 ZBED4O75132 1171 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 ACSL3O95573 720 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 PRDX5P30044 214 aa7.82□□□□□ -1.16
CMTM4-205ENST00000581487 DMC1Q14565 340 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms