RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 POLR3BQ9NW08 1133 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 VPS54Q9P1Q0 977 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SLC8A2Q9UPR5 921 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 BACE2Q9Y5Z0 518 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DCLK1O15075 740 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MICAL2O94851 1124 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CEACAM1P13688 526 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 YWHABP31946 246 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CTHP32929 405 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MLLT6P55198 1093 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 AKAP17AQ02040 695 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CAPSQ13938 189 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MXD4Q14582 209 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 C1orf228Q6PIY5 440 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ANKS3Q6ZW76 656 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 OTUD6AQ7L8S5 288 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ELMOD1Q8N336 334 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ZNF461Q8TAF7 563 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ASAP3Q8TDY4 903 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MSANTD3Q96H12 275 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ZFYVE19Q96K21 471 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 LSG1Q9H089 658 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 GTSE1Q9NYZ3 720 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 KLK13Q9UKR3 277 aa14.59□□□□□ -0.07
CDK5RAP3-213ENST00000579605 A0A1B0GUA9 196 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 MYBPHLA2RUH7 354 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CHADO15335 359 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SEC24BO95487 1268 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PRKCBP05771 671 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 P4HBP07237 508 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 BRCC3P46736 316 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NLRP5P59047 1200 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NAB2Q15742 525 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TMEM132AQ24JP5 1023 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 RALGPS2Q86X27 583 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ETNPPLQ8TBG4 499 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ZC3H10Q96K80 434 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ESYT1Q9BSJ8 1104 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 DUSP15Q9H1R2 295 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TRPV4Q9HBA0 871 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TMEM9BQ9NQ34 198 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 XPNPEP1Q9NQW7 623 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 RGL1Q9NZL6 768 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PPME1Q9Y570 386 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 INSL5Q9Y5Q6 135 aa14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TDRD15B5MCY1 1934 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-213ENST00000579605 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TICRRQ7Z2Z1 1910 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LNP1A1A4G5 178 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TBX3O15119 743 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PRPF3O43395 683 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 RECQL4O94761 1208 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CLCNKBP51801 687 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 EXOSC10Q01780 885 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TWF1Q12792 350 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CCINQ13939 588 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NECTIN1Q15223 517 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ELF2Q15723 593 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GLRA4Q5JXX5 417 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 PDZD3Q86UT5 571 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CCDC148Q8NFR7 591 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 LXNQ9BS40 222 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ANO2Q9NQ90 1003 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ASAH2Q9NR71 780 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CEP72Q9P209 647 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GDAQ9Y2T3 454 aa14.57□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GREB1Q4ZG55 1949 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NBEAQ8NFP9 2946 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CYP3A7-CYP3A51PA0A087WV96 503 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 RHOBTB1O94844 696 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ABLIM3O94929 683 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 ATF2P15336 505 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CSRP1P21291 193 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CYP3A7P24462 503 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 FGD1P98174 961 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CYP4A11Q02928 519 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TNK2Q07912 1038 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CTTNQ14247 550 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 DHX32Q7L7V1 743 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NOSTRINQ8IVI9 506 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 C4orf19Q8IY42 314 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 TCEAL8Q8IYN2 117 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 SYNPOQ8N3V7 929 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 E2F7Q96AV8 911 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 DYDC2Q96IM9 177 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 HHIPQ96QV1 700 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 GOLGA2P5Q9HBQ8 144 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 INVSQ9Y283 1065 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 USP20Q9Y2K6 914 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 MSRB2Q9Y3D2 182 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 NEUROG3Q9Y4Z2 214 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 AKAP13Q12802 2813 aa14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 DSPP15924 2871 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CCDC163A0A0D9SF12 145 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 BCLAF3A2AJT9 711 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-213ENST00000579605 EIF4E1BA6NMX2 242 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms