RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 MGAT3Q09327 533 aa24.62■■□□□ 1.53
LIMD2-205ENST00000578402 TRPC3Q13507 836 aa24.62■■□□□ 1.53
LIMD2-205ENST00000578402 CCDC122Q5T0U0 273 aa24.62■■□□□ 1.53
LIMD2-205ENST00000578402 SYT10Q6XYQ8 523 aa24.62■■□□□ 1.53
LIMD2-205ENST00000578402 FAM228AQ86W67 206 aa24.62■■□□□ 1.53
LIMD2-205ENST00000578402 DHX38Q92620 1227 aaKnown RBP24.62■■□□□ 1.53
LIMD2-205ENST00000578402 SEZ6LQ9BYH1 1024 aa24.62■■□□□ 1.53
LIMD2-205ENST00000578402 CAND2O75155 1236 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 CUL2Q13617 745 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 TSPAN18Q96SJ8 248 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 TRIM6Q9C030 488 aaPredicted RBP24.61■■□□□ 1.53
LIMD2-205ENST00000578402 APOBEC3GQ9HC16 384 aaKnown RBP24.61■■□□□ 1.53
LIMD2-205ENST00000578402 NAGPAQ9UK23 515 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 PTPN22Q9Y2R2 807 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 NOC2LQ9Y3T9 749 aaKnown RBP24.61■■□□□ 1.53
LIMD2-205ENST00000578402 NFICP08651 508 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 YARSP54577 528 aaKnown RBP24.61■■□□□ 1.53
LIMD2-205ENST00000578402 TMEM132DQ14C87 1099 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 NAB2Q15742 525 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 JADE1Q6IE81 842 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 SLC43A3Q8NBI5 491 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 SLC30A5Q8TAD4 765 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 WNT8BQ93098 351 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 EIF2AQ9BY44 585 aaKnown RBP24.61■■□□□ 1.53
LIMD2-205ENST00000578402 LACRTQ9GZZ8 138 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.61■■□□□ 1.53
LIMD2-205ENST00000578402 WBP1LQ9NX94 342 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 DNAI1Q9UI46 699 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 TSKSQ9UJT2 592 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 PHF24Q9UPV7 400 aa24.61■■□□□ 1.53
LIMD2-205ENST00000578402 CITO14578 2027 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 RCCD1A6NED2 376 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 CST3P01034 146 aaPredicted RBP24.6■■□□□ 1.53
LIMD2-205ENST00000578402 OLIG1Q8TAK6 271 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 ZNF592Q92610 1267 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 AGPAT1Q99943 283 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 CHST12Q9NRB3 414 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 NUB1Q9Y5A7 615 aa24.6■■□□□ 1.53
LIMD2-205ENST00000578402 HTTP42858 3142 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 DDX3XO00571 662 aaKnown RBP eCLIP24.59■■□□□ 1.53
LIMD2-205ENST00000578402 RPS6KA5O75582 802 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 CHRNA1P02708 482 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 MYL6P60660 151 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 FAM26DQ5JW98 314 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 UBXN11Q5T124 520 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 SPOPLQ6IQ16 392 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 ALKBH5Q6P6C2 394 aaKnown RBP24.59■■□□□ 1.53
LIMD2-205ENST00000578402 C1orf127Q8N9H9 656 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 SNX27Q96L92 541 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 SNTG2Q9NY99 539 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 ITGA11Q9UKX5 1188 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 INTUQ9ULD6 942 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 GUCA1BQ9UMX6 200 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 CNTN6Q9UQ52 1028 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 NOD1Q9Y239 953 aa24.59■■□□□ 1.53
LIMD2-205ENST00000578402 A0A0U1RQG5 324 aaPredicted RBP24.58■■□□□ 1.53
LIMD2-205ENST00000578402 A0A1W2PQ45 241 aaPredicted RBP24.58■■□□□ 1.53
LIMD2-205ENST00000578402 A0A1W2PQY0 241 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 KBTBD13C9JR72 458 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 ATICP31939 592 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 THPOP40225 353 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 USP8P40818 1118 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 BPIFB4P59827 614 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 EPS8L1Q8TE68 723 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 SH3TC2Q8TF17 1288 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 NIF3L1Q9GZT8 377 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 XYLT2Q9H1B5 865 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 VRTNQ9H8Y1 702 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 NOCTQ9UK39 431 aaKnown RBP24.58■■□□□ 1.53
LIMD2-205ENST00000578402 SQORQ9Y6N5 450 aa24.58■■□□□ 1.53
LIMD2-205ENST00000578402 CYP26A1O43174 497 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 ABL1P00519 1130 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 ACO1P21399 889 aaKnown RBP24.57■■□□□ 1.52
LIMD2-205ENST00000578402 TNFAIP3P21580 790 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 PDE6CP51160 858 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 TRIM71Q2Q1W2 868 aaKnown RBP24.57■■□□□ 1.52
LIMD2-205ENST00000578402 ZNF699Q32M78 642 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 CXorf38Q8TB03 319 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 LNX1Q8TBB1 728 aaPredicted RBP24.57■■□□□ 1.52
LIMD2-205ENST00000578402 IRX2Q9BZI1 471 aaPredicted RBP24.57■■□□□ 1.52
LIMD2-205ENST00000578402 PAK6Q9NQU5 681 aaPredicted RBP24.57■■□□□ 1.52
LIMD2-205ENST00000578402 STARD7Q9NQZ5 370 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 CNTN3Q9P232 1028 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 TRIM10Q9UDY6 481 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 SIX4Q9UIU6 781 aa24.57■■□□□ 1.52
LIMD2-205ENST00000578402 BTNL10A8MVZ5 291 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 GPR182O15218 404 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 STAU1O95793 577 aaKnown RBP24.56■■□□□ 1.52
LIMD2-205ENST00000578402 CYP11B1P15538 503 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 CASQ1P31415 396 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 ZNF569Q5MCW4 686 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 ALKAL1Q6UXT8 129 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 ZNF677Q86XU0 584 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 GLYCTKQ8IVS8 523 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 RNF10Q8N5U6 811 aaKnown RBP24.56■■□□□ 1.52
LIMD2-205ENST00000578402 UBR7Q8N806 425 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 SECISBP2LQ93073 1101 aaKnown RBP24.56■■□□□ 1.52
LIMD2-205ENST00000578402 WDR24Q96S15 920 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 ARID3AQ99856 593 aa24.56■■□□□ 1.52
LIMD2-205ENST00000578402 NXF3Q9H4D5 531 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms