RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CLDN10P78369 228 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 MAN2A1Q16706 1144 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 TCERG1LQ5VWI1 586 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 ALKAL1Q6UXT8 129 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 RNF214Q8ND24 703 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 PHOSPHO2Q8TCD6 241 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 CACTINQ8WUQ7 758 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 TOP1MTQ969P6 601 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 TUBGCP2Q9BSJ2 902 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 MRPL9Q9BYD2 267 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 PDE11AQ9HCR9 933 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 SLC38A7Q9NVC3 462 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 KANSL3Q9P2N6 904 aa12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 LIMA1Q9UHB6 759 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC8-204ENST00000578252 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 FNDC1Q4ZHG4 1894 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 ARL5CA6NH57 179 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 LACTBL1A8MY62 500 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 OFD1O75665 1012 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 TNNC2P02585 160 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 THP07101 528 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 TMEM191BP0C7N4 346 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 TNNI1P19237 187 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 MLH1P40692 756 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 GRIK3Q13003 919 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 TMEM132DQ14C87 1099 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 DUOXA2Q1HG44 320 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 DCAF17Q5H9S7 520 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 CREBRFQ8IUR6 639 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 CRIPAKQ8N1N5 446 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 BEST2Q8NFU1 509 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 LPPQ93052 612 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 SLC35C1Q96A29 364 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 CCDC127Q96BQ5 260 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 ANKRD36BP1Q96IX9 119 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 UBQLN1Q9UMX0 589 aaKnown RBP12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 SLC4A7Q9Y6M7 1214 aa12.11□□□□□ -0.47
TRAPPC8-204ENST00000578252 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 SMIM28A0A1B0GU29 152 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 CARNS1A5YM72 827 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 LRRC10BA6NIK2 292 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 PMM2O15305 246 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 P4HA2O15460 535 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 AFPP02771 609 aaKnown RBP12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 CYP3A5P20815 502 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 DEFB103AP81534 67 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 CETN1Q12798 172 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 KRT31Q15323 416 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 RASIP1Q5U651 963 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 JADE1Q6IE81 842 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 HELQQ8TDG4 1101 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 GAD1Q99259 594 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 GDF15Q99988 308 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 TMEM8AQ9HCN3 771 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 KLK14Q9P0G3 267 aa12.1□□□□□ -0.47
TRAPPC8-204ENST00000578252 MEIS3P2A8K0S8 358 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 H0YGN5 161 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 PTGESO14684 152 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 MEFVO15553 781 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 CBFA2T2O43439 604 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 DGKIO75912 1065 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 SERPINC1P01008 464 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 TPM3P06753 285 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 TRIM49P0CI25 452 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 TRIM49CP0CI26 452 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 FGFR1P11362 822 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 BMP8BP34820 402 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 MXI1P50539 228 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 SCNN1GP51170 649 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 MLLT1Q03111 559 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 KCNH2Q12809 1159 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 ZBTB6Q15916 424 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 VWA3BQ502W6 1294 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 KRT39Q6A163 491 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
TRAPPC8-204ENST00000578252 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms