RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 LILRA6Q6PI73 481 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 SFR1Q86XK3 245 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 PDILTQ8N807 584 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 C3orf58Q8NDZ4 430 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 KCNN1Q92952 543 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 RHOBTB2Q9BYZ6 727 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
SF3B3-215ENST00000577085 MTRRQ9UBK8 725 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 SEL1LQ9UBV2 794 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 FBXW11Q9UKB1 542 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 POLIQ9UNA4 740 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 EXOC7Q9UPT5 735 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
SF3B3-215ENST00000577085 CLUHO75153 1309 aa16.89■□□□□ 0.29
SF3B3-215ENST00000577085 PLXNA3P51805 1871 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 SYN3O14994 580 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 XYLBO75191 536 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 ASGR2P07307 311 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 ELF1P32519 619 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 TNFSF9P41273 254 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 RAB33AQ14088 237 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
SF3B3-215ENST00000577085 ADALQ6DHV7 355 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
SF3B3-215ENST00000577085 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 LINC00301Q8NCQ3 95 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 APPL2Q8NEU8 664 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 SLC7A14Q8TBB6 771 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 FEZF2Q8TBJ5 459 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 HVCN1Q96D96 273 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 LRRC27Q9C0I9 530 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 HAPLN2Q9GZV7 340 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 TUBGCP4Q9UGJ1 667 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 UBQLN1Q9UMX0 589 aaKnown RBP16.88■□□□□ 0.29
SF3B3-215ENST00000577085 ARIH1Q9Y4X5 557 aaPredicted RBP16.88■□□□□ 0.29
SF3B3-215ENST00000577085 BACE2Q9Y5Z0 518 aa16.88■□□□□ 0.29
SF3B3-215ENST00000577085 A0A0B4J269 797 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 MYMKA6NI61 221 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 ADAM12O43184 909 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 PPP6R2O75170 966 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 GCNT3O95395 438 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 YEATS4O95619 227 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 HNRNPA1P09651 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 IGFBP6P24592 240 aaPredicted RBP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 ARPP19P56211 112 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 AXDND1Q5T1B0 1012 aaPredicted RBP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 GET4Q7L5D6 327 aaPredicted RBP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 ZNF720Q7Z2F6 126 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 CD302Q8IX05 232 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 ZNF707Q96C28 371 aaPredicted RBP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 TSPAN18Q96SJ8 248 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 ST6GALNAC4Q9H4F1 302 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.29
SF3B3-215ENST00000577085 TBC1D7Q9P0N9 293 aa16.87■□□□□ 0.29
SF3B3-215ENST00000577085 PRRG1O14668 218 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 CCL16O15467 120 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 CYP3A5P20815 502 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 POSTNQ15063 836 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 ENOX2Q16206 610 aaKnown RBP16.86■□□□□ 0.29
SF3B3-215ENST00000577085 UVSSAQ2YD98 709 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 CTXN3Q4LDR2 81 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 CD300LGQ6UXG3 332 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 BMP8AQ7Z5Y6 402 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 SYCP3Q8IZU3 236 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 BEST2Q8NFU1 509 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 ACCSQ96QU6 501 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 PANK4Q9NVE7 773 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 AGO2Q9UKV8 859 aaKnown RBP16.86■□□□□ 0.29
SF3B3-215ENST00000577085 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
SF3B3-215ENST00000577085 MEFVO15553 781 aaPredicted RBP16.85■□□□□ 0.29
SF3B3-215ENST00000577085 CUTAO60888 179 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 F13A1P00488 732 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 FSHRP23945 695 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 HOXA9P31269 272 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 PLA2G5P39877 138 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 ME1P48163 572 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 ACOT2P49753 483 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 AMPD3Q01432 767 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 TDGQ13569 410 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 ZBTB41Q5SVQ8 909 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 DSTYKQ6XUX3 929 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 STXBP4Q6ZWJ1 553 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 RTL10Q7L3V2 364 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 GRASPQ7Z6J2 395 aaPredicted RBP16.85■□□□□ 0.29
SF3B3-215ENST00000577085 USP37Q86T82 979 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 FBXL6Q8N531 539 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 ZNF461Q8TAF7 563 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 SUSD3Q96L08 255 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 FIZ1Q96SL8 496 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 MFSD1Q9H3U5 465 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms