RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SMAP1Q8IYB5 467 aaPredicted RBP7□□□□□ -1.29
NUP88-212ENST00000576708 THNSL1Q8IYQ7 743 aa7□□□□□ -1.29
NUP88-212ENST00000576708 FBXL16Q8N461 479 aa7□□□□□ -1.29
NUP88-212ENST00000576708 DTWD1Q8N5C7 304 aa7□□□□□ -1.29
NUP88-212ENST00000576708 EFHBQ8N7U6 833 aa7□□□□□ -1.29
NUP88-212ENST00000576708 COLGALT1Q8NBJ5 622 aa7□□□□□ -1.29
NUP88-212ENST00000576708 CCDC148Q8NFR7 591 aa7□□□□□ -1.29
NUP88-212ENST00000576708 VN1R2Q8NFZ6 395 aa7□□□□□ -1.29
NUP88-212ENST00000576708 BICD2Q8TD16 824 aa7□□□□□ -1.29
NUP88-212ENST00000576708 MICAL1Q8TDZ2 1067 aa7□□□□□ -1.29
NUP88-212ENST00000576708 MSLNLQ96KJ4 702 aa7□□□□□ -1.29
NUP88-212ENST00000576708 APOL5Q9BWW9 433 aa7□□□□□ -1.29
NUP88-212ENST00000576708 TEKT3Q9BXF9 490 aa7□□□□□ -1.29
NUP88-212ENST00000576708 TLE6Q9H808 572 aa7□□□□□ -1.29
NUP88-212ENST00000576708 ATP6V0A4Q9HBG4 840 aa7□□□□□ -1.29
NUP88-212ENST00000576708 C1orf112Q9NSG2 853 aa7□□□□□ -1.29
NUP88-212ENST00000576708 NRBP2Q9NSY0 501 aa7□□□□□ -1.29
NUP88-212ENST00000576708 GJB4Q9NTQ9 266 aa7□□□□□ -1.29
NUP88-212ENST00000576708 KCNK4Q9NYG8 393 aa7□□□□□ -1.29
NUP88-212ENST00000576708 GPN3Q9UHW5 284 aaPredicted RBP7□□□□□ -1.29
NUP88-212ENST00000576708 MUTYHQ9UIF7 546 aa7□□□□□ -1.29
NUP88-212ENST00000576708 KCNJ14Q9UNX9 436 aa7□□□□□ -1.29
NUP88-212ENST00000576708 EVPLQ92817 2033 aa7□□□□□ -1.29
NUP88-212ENST00000576708 HIDE1A8MVS5 230 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 RNF225M0QZC1 329 aaPredicted RBP6.99□□□□□ -1.29
NUP88-212ENST00000576708 MAGEB2O15479 319 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 PSMD10O75832 226 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 REC8O95072 547 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 ALADP13716 330 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 GPC3P51654 580 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 USP11P51784 963 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 NLRP12P59046 1061 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 TARBP2Q15633 366 aaKnown RBP6.99□□□□□ -1.29
NUP88-212ENST00000576708 FOXD4L6Q3SYB3 417 aaPredicted RBP6.99□□□□□ -1.29
NUP88-212ENST00000576708 MTERF2Q49AM1 385 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 CLLU1OSQ5K130 101 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 MEI1Q5TIA1 1274 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 PLPP4Q5VZY2 271 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 PLA2G4FQ68DD2 849 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 LLGL2Q6P1M3 1020 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 FOXD4L3Q6VB84 417 aaPredicted RBP6.99□□□□□ -1.29
NUP88-212ENST00000576708 MIER3Q7Z3K6 550 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 ECHDC2Q86YB7 292 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 KSR1Q8IVT5 923 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 BLIDQ8IZY5 108 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 FAM167AQ96KS9 214 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 SCLT1Q96NL6 688 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 CASD1Q96PB1 797 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 MAP7D2Q96T17 732 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 RIT2Q99578 217 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 PDRG1Q9NUG6 133 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 TMEM161AQ9NX61 479 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 PRKAG3Q9UGI9 489 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 CDH22Q9UJ99 828 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 PCDHA4Q9UN74 947 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 CEP131Q9UPN4 1083 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 FAM50BQ9Y247 325 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 USP15Q9Y4E8 981 aaPredicted RBP6.99□□□□□ -1.29
NUP88-212ENST00000576708 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 CYP46A1Q9Y6A2 500 aa6.99□□□□□ -1.29
NUP88-212ENST00000576708 FNDC1Q4ZHG4 1894 aaPredicted RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 NCOR1O75376 2440 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 A0A087WZ62 844 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 MEIS3P2A8K0S8 358 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 PRR33A8MZF0 331 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 NT5C1B-RDH14C9J2C7 533 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 CPLX1O14810 134 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 TM4SF5O14894 197 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 SLC37A4O43826 429 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 ADAM11O75078 769 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 DEXIO95424 95 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 EYA4O95677 639 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 SPATA31C1P0DKV0 1188 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 DARSP14868 501 aaKnown RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 ATF7P17544 494 aaPredicted RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 TMOD1P28289 359 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 ARL4DP49703 201 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 JAK3P52333 1124 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 DUSP6Q16828 381 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 INF2Q27J81 1249 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 Q4G0T1 1027 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 EARS2Q5JPH6 523 aaKnown RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 ODR4Q5SWX8 454 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 KCNT2Q6UVM3 1135 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 B3GNT9Q6UX72 402 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 ETNPPLQ8TBG4 499 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 MRPS27Q92552 414 aaKnown RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 LPPQ93052 612 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 ZNF274Q96GC6 653 aaPredicted RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 MBOAT7Q96N66 472 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 FDXACB1Q9BRP7 624 aaPredicted RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 TMEM117Q9H0C3 514 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 ELAC1Q9H777 363 aaKnown RBP6.98□□□□□ -1.29
NUP88-212ENST00000576708 SH3GLB2Q9NR46 395 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 TLR9Q9NR96 1032 aa6.98□□□□□ -1.29
NUP88-212ENST00000576708 C5orf42Q9H799 3197 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms