RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 H7C4K7 107 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 I3L4J1 428 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 WNT7AO00755 349 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 MED24O75448 989 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 ABLIM3O94929 683 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 ATF2P15336 505 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 FCARP24071 287 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 RPA1P27694 616 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 MCM7P33993 719 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 BRCC3P46736 316 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 GRM2Q14416 872 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 IQCEQ6IPM2 695 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 PDZD4Q76G19 769 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 TCEAL8Q8IYN2 117 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 KIFAP3Q92845 792 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 CHRDQ9H2X0 955 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 CYP4F11Q9HBI6 524 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 GOLGA2P5Q9HBQ8 144 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 USP20Q9Y2K6 914 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 TRIP11Q15643 1979 aa12.79□□□□□ -0.36
CTDNEP1-212ENST00000576613 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 SMIM28A0A1B0GU29 152 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 K7ERI5 159 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 SYN3O14994 580 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 EDN1P05305 212 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 PSMC3P17980 439 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 MUTP22033 750 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 IGFBP6P24592 240 aaPredicted RBP12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 CCR3P51677 355 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 ARPP19P56211 112 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 FZD5Q13467 585 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 PRSS36Q5K4E3 855 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 TPGS2Q68CL5 300 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 HAUS3Q68CZ6 603 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 LAIR1Q6GTX8 287 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 CELF5Q8N6W0 485 aaKnown RBP12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 DEPDC1BQ8WUY9 529 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 GTF3C6Q969F1 213 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 ASB16Q96NS5 453 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 KIFC3Q9BVG8 833 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 TRPV5Q9NQA5 729 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 NUB1Q9Y5A7 615 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 INSL5Q9Y5Q6 135 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 COL4A2P08572 1712 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 ACACBO00763 2458 aa12.78□□□□□ -0.36
CTDNEP1-212ENST00000576613 PODXLO00592 558 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 LRP3O75074 770 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 TGM1P22735 817 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 GDI1P31150 447 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 GRM5P41594 1212 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 ORC2Q13416 577 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 SAFBQ15424 915 aaKnown RBP eCLIP12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF568Q3ZCX4 644 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF687Q8N1G0 1237 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 NECAB1Q8N987 351 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 LEMD2Q8NC56 503 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 FAM3CQ92520 227 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 TCEAL4Q96EI5 215 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF512Q96ME7 567 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF334Q9HCZ1 680 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 MAFFQ9ULX9 164 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 TNFSF13BQ9Y275 285 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 PIAS3Q9Y6X2 628 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.37
CTDNEP1-212ENST00000576613 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 SHISA7A6NL88 538 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF263O14978 683 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 RETP07949 1114 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 TDGF1P13385 188 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 FOSBP53539 338 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 ANAPC15P60006 121 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 SPEM2Q0P670 501 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 CTXN3Q4LDR2 81 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 XKR4Q5GH76 650 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 POTEHQ6S545 545 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 VITQ6UXI7 678 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 PRR23BQ6ZRT6 265 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 MAP4K3Q8IVH8 894 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 NETO1Q8TDF5 533 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 MSANTD3Q96H12 275 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 MRPL4Q9BYD3 311 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 CDT1Q9H211 546 aa12.76□□□□□ -0.37
CTDNEP1-212ENST00000576613 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms