RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 SYT13Q7L8C5 426 aa16.3■□□□□ 0.2
SLC12A4-216ENST00000576377 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
SLC12A4-216ENST00000576377 PILRBQ9UKJ0 227 aa16.3■□□□□ 0.2
SLC12A4-216ENST00000576377 SLC6A14Q9UN76 642 aa16.3■□□□□ 0.2
SLC12A4-216ENST00000576377 LRBAP50851 2863 aa16.3■□□□□ 0.2
SLC12A4-216ENST00000576377 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 DKK1O94907 266 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 LRG1P02750 347 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 GRSF1Q12849 480 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 PEAR1Q5VY43 1037 aaPredicted RBP16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 MIS18BP1Q6P0N0 1132 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 RTL10Q7L3V2 364 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 TMC8Q8IU68 726 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 FRMD1Q8N878 549 aa16.29■□□□□ 0.2
SLC12A4-216ENST00000576377 ZMYM6O95789 1325 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 POLQO75417 2590 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 PLK4O00444 970 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 RRP8O43159 456 aaKnown RBP16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 ITGA4P13612 1032 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 TLE3Q04726 772 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 NAIF1Q69YI7 327 aaPredicted RBP16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 LPCAT2Q7L5N7 544 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 RLN3Q8WXF3 142 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 SLITRK6Q9H5Y7 841 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 FBRSL1Q9HCM7 1045 aaKnown RBP16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 PCOLCE2Q9UKZ9 415 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 HES2Q9Y543 173 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 CDY1Q9Y6F8 540 aa16.28■□□□□ 0.2
SLC12A4-216ENST00000576377 ARHGAP33O14559 1287 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 HMMRO75330 724 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 KIF4AO95239 1232 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 SERPINF2P08697 491 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 ATXN1LP0C7T5 689 aaKnown RBP16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 POU3F2P20265 443 aaPredicted RBP16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 SEMG2Q02383 582 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 HSP90AA2PQ14568 343 aaPredicted RBP16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 LYSMD4Q5XG99 296 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 ANO7Q6IWH7 933 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 ZNF574Q6ZN55 896 aaPredicted RBP16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 TSTD1Q8NFU3 115 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 IPPQ9Y573 584 aa16.27■□□□□ 0.2
SLC12A4-216ENST00000576377 SETD2Q9BYW2 2564 aaPredicted RBP16.27■□□□□ 0.19
SLC12A4-216ENST00000576377 TERTO14746 1132 aaKnown RBP16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 MYL4P12829 197 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 HLA-EP13747 358 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 U2AF2P26368 475 aaKnown RBP eCLIP16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 HOXA11P31270 313 aaPredicted RBP16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 RHDQ02161 417 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 SLC14A1Q13336 389 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 DUOXA1Q1HG43 343 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 ARHGAP29Q52LW3 1261 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 HIST2H2BCQ6DN03 193 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 RASSF3Q86WH2 238 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 KSR1Q8IVT5 923 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 GALNT15Q8N3T1 639 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 GSTCDQ8NEC7 633 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 MDGA1Q8NFP4 955 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 SHKBP1Q8TBC3 707 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 E2F7Q96AV8 911 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 MTRRQ9UBK8 725 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 GABBR1Q9UBS5 961 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 PCDHA6Q9UN73 950 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 PCDHA8Q9Y5H6 950 aa16.26■□□□□ 0.19
SLC12A4-216ENST00000576377 NUP210Q8TEM1 1887 aaPredicted RBP16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 KNTC1P50748 2209 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 GOLGA8CPA6NN73 597 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 TRDMT1O14717 391 aaKnown RBP16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 ITPRIPL2Q3MIP1 535 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 STXBP5Q5T5C0 1151 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 CYP4A22Q5TCH4 519 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 EZH1Q92800 747 aaPredicted RBP16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 EIF2AQ9BY44 585 aaKnown RBP16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 UBN1Q9NPG3 1134 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 ZSWIM5Q9P217 1185 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 CEP192Q8TEP8 1941 aa16.25■□□□□ 0.19
SLC12A4-216ENST00000576377 ZFHX3Q15911 3703 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 DHX15O43143 795 aaKnown RBP16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 CR2P20023 1033 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 UBAP2LQ14157 1087 aaKnown RBP16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 C2orf27AQ580R0 203 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 ZNF746Q6NUN9 644 aaPredicted RBP16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 OLIG1Q8TAK6 271 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 PANK1Q8TE04 598 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 TTC9Q92623 222 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 MED8Q96G25 268 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 CNOT6LQ96LI5 555 aaKnown RBP16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 NLRP4Q96MN2 994 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 INO80BQ9C086 356 aaPredicted RBP16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 BSNQ9UPA5 3926 aa16.24■□□□□ 0.19
SLC12A4-216ENST00000576377 PLXND1Q9Y4D7 1925 aa16.23■□□□□ 0.19
SLC12A4-216ENST00000576377 OTOL1A6NHN0 477 aaPredicted RBP16.23■□□□□ 0.19
SLC12A4-216ENST00000576377 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms