RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 CYP3A5P20815 502 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 LRPAP1P30533 357 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 CLDN10P78369 228 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 UPP1Q16831 310 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 PARD3BQ8TEW8 1205 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 CGRRF1Q99675 332 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 TSG101Q99816 390 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
LITAF-218ENST00000576036 AAASQ9NRG9 546 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 SLC38A7Q9NVC3 462 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 SPG21Q9NZD8 308 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 UBQLN1Q9UMX0 589 aaKnown RBP16.97■□□□□ 0.31
LITAF-218ENST00000576036 FAN1Q9Y2M0 1017 aa16.97■□□□□ 0.31
LITAF-218ENST00000576036 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 LRRIQ3A6PVS8 624 aaPredicted RBP16.96■□□□□ 0.31
LITAF-218ENST00000576036 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
LITAF-218ENST00000576036 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
LITAF-218ENST00000576036 FKBP3Q00688 224 aaKnown RBP16.96■□□□□ 0.31
LITAF-218ENST00000576036 PLCB3Q01970 1234 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 TYRO3Q06418 890 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 GPM6BQ13491 265 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
LITAF-218ENST00000576036 IRF2BP1Q8IU81 584 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 FAM186BQ8IYM0 893 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 C1orf127Q8N9H9 656 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 HASPINQ8TF76 798 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 CCDC127Q96BQ5 260 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 MKNK1Q9BUB5 465 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 MTMR12Q9C0I1 747 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 INTS13Q9NVM9 706 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 MTMR10Q9NXD2 777 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 SIX4Q9UIU6 781 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 PCDHB12Q9Y5F1 795 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 PLXNA3P51805 1871 aa16.96■□□□□ 0.31
LITAF-218ENST00000576036 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 PODXLO00592 558 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 CETN3O15182 167 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 ALDH2P05091 517 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 ERCC5P28715 1186 aaPredicted RBP16.95■□□□□ 0.3
LITAF-218ENST00000576036 PPM1AP35813 382 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 PSMC2P35998 433 aaKnown RBP16.95■□□□□ 0.3
LITAF-218ENST00000576036 STX1AQ16623 288 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 SKOR2Q2VWA4 1001 aaPredicted RBP16.95■□□□□ 0.3
LITAF-218ENST00000576036 C9orf57Q5W0N0 161 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 TAS1R1Q7RTX1 841 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 NT5DC4Q86YG4 428 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 WDR49Q8IV35 697 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 DEFB123Q8N688 67 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 TMC2Q8TDI7 906 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
LITAF-218ENST00000576036 CEP63Q96MT8 703 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 UROC1Q96N76 676 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 C11orf84Q9BUA3 381 aaPredicted RBP16.95■□□□□ 0.3
LITAF-218ENST00000576036 GPR62Q9BZJ7 368 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 DPP3Q9NY33 737 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 FRMD4BQ9Y2L6 1034 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 PCDHGC5Q9Y5F6 944 aa16.95■□□□□ 0.3
LITAF-218ENST00000576036 SYCE3A1L190 88 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 PIRO00625 290 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 FSCN2O14926 492 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 SPTLC1O15269 473 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 SLC16A3O15427 465 aaKnown RBP16.94■□□□□ 0.3
LITAF-218ENST00000576036 TRIM49P0CI25 452 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 TRIM49CP0CI26 452 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 DLATP10515 647 aaKnown RBP16.94■□□□□ 0.3
LITAF-218ENST00000576036 RPL9P32969 192 aaKnown RBP16.94■□□□□ 0.3
LITAF-218ENST00000576036 IRS1P35568 1242 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 BRCC3P46736 316 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 ERVFC1P60507 584 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 TFAMQ00059 246 aaKnown RBP16.94■□□□□ 0.3
LITAF-218ENST00000576036 PPP3CAQ08209 521 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 BFSP1Q12934 665 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 CSGALNACT2Q8N6G5 542 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 BEST2Q8NFU1 509 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 POF1BQ8WVV4 589 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 DDX27Q96GQ7 796 aaKnown RBP16.94■□□□□ 0.3
LITAF-218ENST00000576036 ADAM28Q9UKQ2 775 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 LZTS1Q9Y250 596 aa16.94■□□□□ 0.3
LITAF-218ENST00000576036 I3L4J1 428 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 SLC34A2O95436 690 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 AARSP49588 968 aaKnown RBP eCLIP16.93■□□□□ 0.3
LITAF-218ENST00000576036 VAMP7P51809 220 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 SURF1Q15526 300 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 ZSCAN23Q3MJ62 389 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 FUT10Q6P4F1 479 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 DCLRE1AQ6PJP8 1040 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 C15orf39Q6ZRI6 1047 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 FILIP1Q7Z7B0 1213 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 DDX53Q86TM3 631 aaKnown RBP16.93■□□□□ 0.3
LITAF-218ENST00000576036 TMEM169Q96HH4 297 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
LITAF-218ENST00000576036 COLEC11Q9BWP8 271 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
LITAF-218ENST00000576036 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 ANO10Q9NW15 660 aa16.93■□□□□ 0.3
LITAF-218ENST00000576036 XPOTO43592 962 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms