RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZNF653Q96CK0 615 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 OPTNQ96CV9 577 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 TUBGCP5Q96RT8 1024 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 RBM15Q96T37 977 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMG6-215ENST00000574501 FAM192AQ9GZU8 254 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 SYNCQ9H7C4 482 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 SAR1AQ9NR31 198 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 LRRC4BQ9NT99 713 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 CHCHD3Q9NX63 227 aaKnown RBP15.3■□□□□ 0.04
SMG6-215ENST00000574501 KANSL3Q9P2N6 904 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 FRMD4BQ9Y2L6 1034 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 RPS6KL1Q9Y6S9 549 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 ARFGEF1Q9Y6D6 1849 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 PRPF4O43172 522 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMG6-215ENST00000574501 RPA1P27694 616 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 IZUMO3Q5VZ72 239 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 RGS9BPQ6ZS82 235 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 KCTD1Q719H9 257 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 LMO3Q8TAP4 145 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 C12orf65Q9H3J6 166 aaKnown RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 STX18Q9P2W9 335 aaKnown RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 HEY2Q9UBP5 337 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 SORBS3O60504 671 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 SPATA31D3P0C874 917 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 AMPD1P23109 780 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 CETN2P41208 172 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 PIK3CAP42336 1068 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 RTP1P59025 263 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 PPP2R5CQ13362 524 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 DAB2IPQ5VWQ8 1189 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 FYB2Q5VWT5 728 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 SPATA31D4Q6ZUB0 917 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 NOP9Q86U38 636 aaKnown RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 MORC4Q8TE76 937 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 PTCD3Q96EY7 689 aaKnown RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 DYDC2Q96IM9 177 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 SPATA16Q9BXB7 569 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 DCLK3Q9C098 648 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 ALG13Q9NP73 1137 aaKnown RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 SAYSD1Q9NPB0 183 aa15.29■□□□□ 0.04
SMG6-215ENST00000574501 FBXO6Q9NRD1 293 aaPredicted RBP15.29■□□□□ 0.04
SMG6-215ENST00000574501 ZBTB39O15060 712 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 HAUS5O94927 633 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 FAM13AO94988 1023 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 BTDP43251 543 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 PSMC4P43686 418 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 CAV1Q03135 178 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 PHLDB2Q86SQ0 1253 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 SYCP3Q8IZU3 236 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 PDCD7Q8N8D1 485 aaKnown RBP15.28■□□□□ 0.04
SMG6-215ENST00000574501 ERMNQ8TAM6 284 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 MTMR4Q9NYA4 1195 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 MAST2Q6P0Q8 1798 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 LMNB2Q03252 620 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 FASTKD3Q14CZ7 662 aaKnown RBP15.28■□□□□ 0.04
SMG6-215ENST00000574501 TCEAL1Q15170 157 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 RINT1Q6NUQ1 792 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 ZNF365Q70YC5 407 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 SLC47A2Q86VL8 602 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 DTNBP1Q96EV8 351 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 NSL1Q96IY1 281 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 ANO3Q9BYT9 981 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 ZWILCHQ9H900 591 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
SMG6-215ENST00000574501 DDX60LQ5H9U9 1706 aaKnown RBP15.28■□□□□ 0.04
SMG6-215ENST00000574501 C2orf71A6NGG8 1288 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 RAD21O60216 631 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 PIAS1O75925 651 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 PLS3P13797 630 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 PCNX4Q63HM2 1172 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 SESTD1Q86VW0 696 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 GRK7Q8WTQ7 553 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 MAK16Q9BXY0 300 aaKnown RBP15.27■□□□□ 0.04
SMG6-215ENST00000574501 PREBQ9HCU5 417 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 AGPAT3Q9NRZ7 376 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 TAS2R1Q9NYW7 299 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.04
SMG6-215ENST00000574501 EMSYQ7Z589 1322 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 CYP26A1O43174 497 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 ZBED4O75132 1171 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 MTA2O94776 668 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 ZWINTO95229 277 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 ADRA1DP25100 572 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 SERPINB3P29508 390 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 HSPA1LP34931 641 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 CPA2P48052 419 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 PPP4CP60510 307 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 BFSP1Q12934 665 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 IZUMO2Q6UXV1 221 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 EPS8L1Q8TE68 723 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 GPR101Q96P66 508 aaPredicted RBP15.27■□□□□ 0.03
SMG6-215ENST00000574501 RTFDC1Q9BY42 306 aaPredicted RBP15.27■□□□□ 0.03
SMG6-215ENST00000574501 VCX3BQ9H321 246 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms