RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ARPP19P56211 112 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 EVCP57679 992 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 SATB1Q01826 763 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 NPY5RQ15761 445 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 FAM187BQ17R55 369 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 DCAF4L1Q3SXM0 396 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 LONP2Q86WA8 852 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 C12orf50Q8NA57 414 aaPredicted RBP13.15□□□□□ -0.3
CTNS-208ENST00000574218 ZNF461Q8TAF7 563 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
CTNS-208ENST00000574218 PDZD7Q9H5P4 517 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 FAM208BQ5VWN6 2430 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 H7C4K7 107 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 MICAL2O94851 1124 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 FCARP24071 287 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 CLCNKBP51801 687 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 KPNA1P52294 538 aaPredicted RBP13.14□□□□□ -0.31
CTNS-208ENST00000574218 ROR1Q01973 937 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 CALCRLQ16602 461 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 GLRA4Q5JXX5 417 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
CTNS-208ENST00000574218 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 SPEM1Q8N4L4 309 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 LEMD2Q8NC56 503 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 PIGOQ8TEQ8 1089 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 SMARCD2Q92925 531 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 ZNF274Q96GC6 653 aaPredicted RBP13.14□□□□□ -0.31
CTNS-208ENST00000574218 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
CTNS-208ENST00000574218 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 FZD8Q9H461 694 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 TRPV5Q9NQA5 729 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 CYP46A1Q9Y6A2 500 aa13.14□□□□□ -0.31
CTNS-208ENST00000574218 NUP210Q8TEM1 1887 aaPredicted RBP13.14□□□□□ -0.31
CTNS-208ENST00000574218 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
CTNS-208ENST00000574218 WDR27A2RRH5 827 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 I3L4J1 428 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 MYL4P12829 197 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTNS-208ENST00000574218 CCNE1P24864 410 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
CTNS-208ENST00000574218 NAB2Q15742 525 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 HEATR6Q6AI08 1181 aaKnown RBP13.13□□□□□ -0.31
CTNS-208ENST00000574218 VITQ6UXI7 678 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 E2F7Q96AV8 911 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
CTNS-208ENST00000574218 GPRC5CQ9NQ84 441 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 INSL5Q9Y5Q6 135 aa13.13□□□□□ -0.31
CTNS-208ENST00000574218 ACKR2O00590 384 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 HRO43593 1189 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 GDF9O60383 454 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 REC8O95072 547 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 CHRNB1P11230 501 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 ATF2P15336 505 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 KRT2P35908 639 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 TXKP42681 527 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 BRCC3P46736 316 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
CTNS-208ENST00000574218 PPP2R5AQ15172 486 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 DGKKQ5KSL6 1271 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 SLC8B1Q6J4K2 584 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 MFSD6LQ8IWD5 586 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 TCEAL8Q8IYN2 117 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
CTNS-208ENST00000574218 IFT74Q96LB3 600 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 GPR88Q9GZN0 384 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 C8orf33Q9H7E9 229 aaPredicted RBP13.12□□□□□ -0.31
CTNS-208ENST00000574218 TOPORSQ9NS56 1045 aaPredicted RBP13.12□□□□□ -0.31
CTNS-208ENST00000574218 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
CTNS-208ENST00000574218 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 HEPACAM2A8MVW5 462 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 SYN3O14994 580 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 ABLIM3O94929 683 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 VIPR2P41587 438 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 LIMK1P53667 647 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 MLLT6P55198 1093 aaPredicted RBP13.11□□□□□ -0.31
CTNS-208ENST00000574218 SRSF5Q13243 272 aaKnown RBP13.11□□□□□ -0.31
CTNS-208ENST00000574218 PTGDRQ13258 359 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 UPP1Q16831 310 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 ZNF280DQ6N043 979 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
CTNS-208ENST00000574218 WASF1Q92558 559 aa13.11□□□□□ -0.31
CTNS-208ENST00000574218 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
CTNS-208ENST00000574218 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
CTNS-208ENST00000574218 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms