RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 GJB6O95452 261 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 RALAP11233 206 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 DSG3P32926 999 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 SSR1P43307 286 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 ZACNQ401N2 412 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 TMEM270Q6UE05 265 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 CTNNAL1Q9UBT7 734 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 HACL1Q9UJ83 578 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 LRRIQ4A6NIV6 560 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 CREB1P16220 341 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 RXRBP28702 533 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 SP2Q02086 613 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 PDE4CQ08493 712 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 TMEM132BQ14DG7 1078 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 EMC2Q15006 297 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 LRRC14Q15048 493 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 SCARA3Q6AZY7 606 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 PRUNE1Q86TP1 453 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 MGARPQ8TDB4 240 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 CENPTQ96BT3 561 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 WRNIP1Q96S55 665 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 APOBEC3GQ9HC16 384 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 A1CFQ9NQ94 594 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 USTQ9Y2C2 406 aa11.96□□□□□ -0.49
RPAIN-212ENST00000573126 ZNFX1Q9P2E3 1918 aaKnown RBP11.96□□□□□ -0.49
RPAIN-212ENST00000573126 MAFGO15525 162 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ZC3H11AO75152 810 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 VNN1O95497 513 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 VIMP08670 466 aaKnown RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 IVDP26440 423 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 NF2P35240 595 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ADCY8P40145 1251 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ITGA8P53708 1063 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 CENPCQ03188 943 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 STRN3Q13033 797 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 KYNUQ16719 465 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ANKRD20A8PQ5CZ79 823 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 XRRA1Q6P2D8 792 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ABHD15Q6UXT9 468 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 MON1BQ7L1V2 547 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 SNF8Q96H20 258 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 WHRNQ9P202 907 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 UMODL1Q5DID0 1318 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 C4BPAP04003 597 aaKnown RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 CYP1A1P04798 512 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 CD58P19256 250 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 MNAT1P51948 309 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 TAS2R40P59535 323 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 PSMD6Q15008 389 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 EXOC3L1Q86VI1 746 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ZNF280CQ8ND82 737 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 REPS2Q8NFH8 660 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 SLCO2A1Q92959 643 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 DCLK3Q9C098 648 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 RBAKQ9NYW8 714 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ADAM22Q9P0K1 906 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 DKC1O60832 514 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 PROSCO94903 275 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 GAS8O95995 478 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 PTPRAP18433 802 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ATP4AP20648 1035 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 GNA15P30679 374 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 RTP1P59025 263 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 FSTL1Q12841 308 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 RHBDF2Q6PJF5 856 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ANKS1BQ7Z6G8 1248 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 ASAP3Q8TDY4 903 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 IPO4Q8TEX9 1081 aaKnown RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 FAM81BQ96LP2 452 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 TARS2Q9BW92 718 aaKnown RBP11.95□□□□□ -0.5
RPAIN-212ENST00000573126 PICK1Q9NRD5 415 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 FBXO40Q9UH90 709 aa11.95□□□□□ -0.5
RPAIN-212ENST00000573126 PEX10O60683 326 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 EDN1P05305 212 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 MYBL1P10243 752 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 ATF2P15336 505 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 ITIH2P19823 946 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 ACO1P21399 889 aaKnown RBP11.94□□□□□ -0.5
RPAIN-212ENST00000573126 SLC1A1P43005 524 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 CLDN10P78369 228 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 MAMLD1Q13495 774 aa11.94□□□□□ -0.5
RPAIN-212ENST00000573126 CUL2Q13617 745 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms