RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 TMEM192Q8IY95 271 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 SLFN12Q8IYM2 578 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 TAB3Q8N5C8 712 aaPredicted RBP10.51□□□□□ -0.73
CIITA-208ENST00000572665 C19orf47Q8N9M1 422 aaKnown RBP10.51□□□□□ -0.73
CIITA-208ENST00000572665 PPP2R3CQ969Q6 453 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 C17orf80Q9BSJ5 609 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 C11orf84Q9BUA3 381 aaPredicted RBP10.51□□□□□ -0.73
CIITA-208ENST00000572665 LMAN2LQ9H0V9 348 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 TCEAL9Q9UHQ7 104 aa10.51□□□□□ -0.73
CIITA-208ENST00000572665 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 GSTTP1A0A1W2PQM5 241 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 KLF4O43474 513 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 ATP9AO75110 1047 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 STAG3L1P0CL83 205 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 NME1P15531 152 aaKnown RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 MARK3P27448 753 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 GSK3AP49840 483 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 ADCY7P51828 1080 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 RCAN1P53805 252 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 UBE2SQ16763 222 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 TCTN1Q2MV58 587 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 LEXMQ3ZCV2 418 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 APOA5Q6Q788 366 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 TSHZ1Q6ZSZ6 1077 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 CENPQQ7L2Z9 268 aaPredicted RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 PLPPR4Q7Z2D5 763 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 FAM20CQ8IXL6 584 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 NME8Q8N427 588 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 CCDC12Q8WUD4 166 aaPredicted RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 DPH2Q9BQC3 489 aaPredicted RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 MXRA8Q9BRK3 442 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
CIITA-208ENST00000572665 BCAS3Q9H6U6 928 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 VCANP13611 3396 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 NFASCO94856 1347 aa10.5□□□□□ -0.73
CIITA-208ENST00000572665 TTC28Q96AY4 2481 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 CHD7Q9P2D1 2997 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.49□□□□□ -0.73
CIITA-208ENST00000572665 MBLAC1A4D2B0 266 aaPredicted RBP10.49□□□□□ -0.73
CIITA-208ENST00000572665 TNFRSF10CO14798 259 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
CIITA-208ENST00000572665 CHRNA1P02708 482 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 NFICP08651 508 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 GHRP10912 638 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 KCNA5P22460 613 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 GUCY2CP25092 1073 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 MAP4P27816 1152 aaKnown RBP10.49□□□□□ -0.73
CIITA-208ENST00000572665 CTNNB1P35222 781 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 STAT5BP51692 787 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 IGBP1P78318 339 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
CIITA-208ENST00000572665 CEP55Q53EZ4 464 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 PRAMEF13Q5VWM6 474 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 FAM160B1Q5W0V3 765 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 NIPA1Q7RTP0 329 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 SPRED2Q7Z698 418 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 DNAJB3Q8WWF6 145 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 KCNH7Q9NS40 1196 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 CDY2AQ9Y6F7 541 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 NCOR1O75376 2440 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 ADGRA3Q8IWK6 1321 aa10.49□□□□□ -0.73
CIITA-208ENST00000572665 SMIM35A0A1B0GVV1 85 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 GOLGA8BA8MQT2 603 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 C5orf67F2Z3F1 127 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 ALADP13716 330 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 INSRRP14616 1297 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 BMPR1AP36894 532 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 ACTR2P61160 394 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 AKAP17AQ02040 695 aaKnown RBP10.48□□□□□ -0.73
CIITA-208ENST00000572665 MGAT3Q09327 533 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
CIITA-208ENST00000572665 LPIN1Q14693 890 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 TMEM31Q5JXX7 168 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 FBXO47Q5MNV8 452 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
CIITA-208ENST00000572665 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 ANO3Q9BYT9 981 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 FOXQ1Q9C009 403 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 BARHL2Q9NY43 387 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 ACTR10Q9NZ32 417 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
CIITA-208ENST00000572665 PCDHA2Q9Y5H9 948 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 TRPV2Q9Y5S1 764 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 TRANK1O15050 2925 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 MYH9P35579 1960 aaKnown RBP10.48□□□□□ -0.73
CIITA-208ENST00000572665 TTC3P53804 2025 aa10.48□□□□□ -0.73
CIITA-208ENST00000572665 SPTBN5Q9NRC6 3674 aaKnown RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 LOXHD1Q8IVV2 1947 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 hCG_1642624A0A1W2PR95 340 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 ENPP3O14638 875 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 DHX15O43143 795 aaKnown RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 HBP1O60381 514 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 CDC45O75419 566 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 LRIG2O94898 1065 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms