RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 KCNA1Q09470 495 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 ADALQ6DHV7 355 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 RSPO2Q6UXX9 243 aaPredicted RBP19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 C15orf39Q6ZRI6 1047 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 EDAQ92838 391 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 FGFBP2Q9BYJ0 223 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 ST6GALNAC4Q9H4F1 302 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 PLEKHA4Q9H4M7 779 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 PLEKHA5Q9HAU0 1116 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 PANK4Q9NVE7 773 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 MTRRQ9UBK8 725 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 CDY1Q9Y6F8 540 aa19.36■□□□□ 0.69
CTDNEP1-207ENST00000572043 PRR33A8MZF0 331 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 ASGR2P07307 311 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 ABCD1P33897 745 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 ARPP19P56211 112 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 ZXDAP98168 799 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 KYAT1Q16773 422 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 PTPN21Q16825 1174 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 VARS2Q5ST30 1063 aaKnown RBP19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 LIN9Q5TKA1 542 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 PDXDC1Q6P996 788 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 CMASQ8NFW8 434 aaPredicted RBP19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 KCNG4Q8TDN1 519 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 POMGNT1Q8WZA1 660 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 ZNF707Q96C28 371 aaPredicted RBP19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 CHAMP1Q96JM3 812 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 SEL1LQ9UBV2 794 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 LIMD1Q9UGP4 676 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 FBXW11Q9UKB1 542 aa19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 CPSF3Q9UKF6 684 aaKnown RBP19.35■□□□□ 0.69
CTDNEP1-207ENST00000572043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 PPP1R37O75864 691 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 C8AP07357 584 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 E2F4Q16254 413 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 AXDND1Q5T1B0 1012 aaPredicted RBP19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 JADE1Q6IE81 842 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 ANKS3Q6ZW76 656 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 HDAC7Q8WUI4 952 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 HPS3Q969F9 1004 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 ACCSQ96QU6 501 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 AGO2Q9UKV8 859 aaKnown RBP19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 UBQLN1Q9UMX0 589 aaKnown RBP19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 PCDHA7Q9UN72 937 aa19.34■□□□□ 0.69
CTDNEP1-207ENST00000572043 ZMYND10O75800 440 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 NFICP08651 508 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 PPM1LQ5SGD2 360 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 SLFN12LQ6IEE8 588 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 CCDC65Q8IXS2 484 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 SYCP3Q8IZU3 236 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 SLC7A14Q8TBB6 771 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 NOC3LQ8WTT2 800 aaKnown RBP19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 HVCN1Q96D96 273 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 STRA6Q9BX79 667 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 PRKD2Q9BZL6 878 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 TNMDQ9H2S6 317 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 SMOC2Q9H3U7 446 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 CFAP45Q9UL16 551 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 POLIQ9UNA4 740 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 EXOC7Q9UPT5 735 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 BACE2Q9Y5Z0 518 aa19.33■□□□□ 0.68
CTDNEP1-207ENST00000572043 CLUHO75153 1309 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 FRMD3A2A2Y4 597 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 CCL16O15467 120 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 POLR2DO15514 142 aaKnown RBP19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 PRPF6O94906 941 aaKnown RBP19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 ADSSP30520 456 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 GBP2P32456 591 aaPredicted RBP19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 ASIC1P78348 528 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 RAB33AQ14088 237 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 TRIM67Q6ZTA4 783 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 HFE2Q6ZVN8 426 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 OTOP3Q7RTS5 596 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 IQUBQ8NA54 791 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 GLIS3Q8NEA6 775 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 SAAL1Q96ER3 474 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 WDR6Q9NNW5 1121 aaKnown RBP19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 OLFML3Q9NRN5 406 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 FAM13BQ9NYF5 915 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 USTQ9Y2C2 406 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 PCDHB13Q9Y5F0 798 aa19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 TIMM13Q9Y5L4 95 aaPredicted RBP19.32■□□□□ 0.68
CTDNEP1-207ENST00000572043 TMEM221A6NGB7 291 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 M0R296 226 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 PPEF2O14830 753 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 SYN3O14994 580 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 XPOTO43592 962 aaKnown RBP19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 C1RP00736 705 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 CASP1P29466 404 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 LRPAP1P30533 357 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 NTHL1P78549 312 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 TMEM132DQ14C87 1099 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 CTXN3Q4LDR2 81 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 GET4Q7L5D6 327 aaPredicted RBP19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 GRASPQ7Z6J2 395 aaPredicted RBP19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZDHHC14Q8IZN3 488 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms