RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PABPC5Q96DU9 382 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 FAM84AQ96KN4 292 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 UROC1Q96N76 676 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 KLHL5Q96PQ7 755 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 GSDMAQ96QA5 445 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 TSPAN18Q96SJ8 248 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 HERC2P3Q9BVR0 1158 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 PDE11AQ9HCR9 933 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 ENTPD7Q9NQZ7 604 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLEC1BQ9P126 229 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 UBQLN1Q9UMX0 589 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 UBE4BO95155 1302 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 ANO9A1A5B4 782 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 ZNF233A6NK53 670 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 I3L4J1 428 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 PIRO00625 290 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 C2CD2LO14523 706 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CNPP09543 421 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 FGFR3P22607 806 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 PRCPP42785 496 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CASP4P49662 377 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CYP2J2P51589 502 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 USP41Q3LFD5 358 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 RTP2Q5QGT7 225 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 ZNF658Q5TYW1 1059 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 PRSS55Q6UWB4 352 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 TMEM184AQ6ZMB5 413 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CEP57Q86XR8 500 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 GUF1Q8N442 669 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CXorf38Q8TB03 319 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 PLEKHO2Q8TD55 490 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 SLC22A17Q8WUG5 538 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 ZNF516Q92618 1163 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 SMARCE1Q969G3 411 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 BORCS6Q96GS4 357 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CCDC34Q96HJ3 373 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 MFSD14AQ96MC6 490 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 GZF1Q9H116 711 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 UBE2ZQ9H832 354 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 RXFP1Q9HBX9 757 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 MRPL17Q9NRX2 175 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 MAN1B1Q9UKM7 699 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 COG5Q9UP83 839 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 DERAQ9Y315 318 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
TRAPPC1-203ENST00000571739 ANK1P16157 1881 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 SPTLC1O15269 473 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 TEX28O15482 410 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 NCK2O43639 380 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 KINO60870 393 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 TBX10O75333 385 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 IL18RAPO95256 599 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 CST3P01034 146 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 BMP1P13497 986 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 CD44P16070 742 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 RPL17P18621 184 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 TKTP29401 623 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 GLUD2P49448 558 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 PMS1P54277 932 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 MRPL58Q14197 206 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 TMEM132DQ14C87 1099 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 SNRNP35Q16560 246 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 CAMK4Q16566 473 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 COBLL1Q53SF7 1204 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 LMBRD2Q68DH5 695 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIAA1841Q6NSI8 718 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 HS2ST1Q7LGA3 356 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 NT5DC4Q86YG4 428 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 GPR65Q8IYL9 337 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 BEST2Q8NFU1 509 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 OR5B17Q8NGF7 314 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 FEZF2Q8TBJ5 459 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 NOC3LQ8WTT2 800 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 ATXN2LQ8WWM7 1075 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 RIN2Q8WYP3 895 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 CCDC47Q96A33 483 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 CDCA3Q99618 268 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLSTN3Q9BQT9 956 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 TTPALQ9BTX7 342 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIAA1586Q9HCI6 787 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 DPP3Q9NY33 737 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 STK39Q9UEW8 545 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 HCFC2Q9Y5Z7 792 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 PDCD11Q14690 1871 aaKnown RBP9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 COL6A3P12111 3177 aa9.42□□□□□ -0.9
TRAPPC1-203ENST00000571739 SF3B1O75533 1304 aaKnown RBP eCLIP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms