RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 LEMD2Q8NC56 503 aa12.51□□□□□ -0.41
CHMP6-202ENST00000571457 CSGALNACT1Q8TDX6 532 aa12.51□□□□□ -0.41
CHMP6-202ENST00000571457 KCNB2Q92953 911 aa12.51□□□□□ -0.41
CHMP6-202ENST00000571457 E2F7Q96AV8 911 aa12.51□□□□□ -0.41
CHMP6-202ENST00000571457 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
CHMP6-202ENST00000571457 POLR3FQ9H1D9 316 aaPredicted RBP12.51□□□□□ -0.41
CHMP6-202ENST00000571457 FZD8Q9H461 694 aa12.51□□□□□ -0.41
CHMP6-202ENST00000571457 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
CHMP6-202ENST00000571457 DSPP15924 2871 aaKnown RBP12.5□□□□□ -0.41
CHMP6-202ENST00000571457 WDR27A2RRH5 827 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 ABLIM3O94929 683 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 ATF2P15336 505 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 CCNE1P24864 410 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 PSMA5P28066 241 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 HOXA6P31267 233 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 ROR1Q01973 937 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 PRPF4BQ13523 1007 aaKnown RBP12.5□□□□□ -0.41
CHMP6-202ENST00000571457 DGKKQ5KSL6 1271 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 MFSD6LQ8IWD5 586 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
CHMP6-202ENST00000571457 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 HSD17B14Q9BPX1 270 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
CHMP6-202ENST00000571457 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 C2orf40Q9H1Z8 148 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 PDZD7Q9H5P4 517 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 C8orf33Q9H7E9 229 aaPredicted RBP12.5□□□□□ -0.41
CHMP6-202ENST00000571457 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 CYP4F11Q9HBI6 524 aa12.5□□□□□ -0.41
CHMP6-202ENST00000571457 ASPMQ8IZT6 3477 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 TICRRQ7Z2Z1 1910 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 H7C4K7 107 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 K7ESF4 209 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 TM4SF5O14894 197 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 XRCC6P12956 609 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 XBP1P17861 261 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 RARRES1P49788 294 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 SRSF5Q13243 272 aaKnown RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 COL9A2Q14055 689 aaPredicted RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 GAS6Q14393 721 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 MAPK6Q16659 721 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 DCAF4L1Q3SXM0 396 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 TPGS2Q68CL5 300 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 CDCA2Q69YH5 1023 aaPredicted RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 HEATR6Q6AI08 1181 aaKnown RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 POTEHQ6S545 545 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 YAF2Q8IY57 180 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 MCPH1Q8NEM0 835 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 ZSCAN18Q8TBC5 510 aaPredicted RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 FAM200AQ8TCP9 573 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 ZNF512Q96ME7 567 aaPredicted RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 RALYQ9UKM9 306 aaKnown RBP12.49□□□□□ -0.41
CHMP6-202ENST00000571457 MAFFQ9ULX9 164 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 GDAQ9Y2T3 454 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 SNX14Q9Y5W7 946 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 GREB1Q4ZG55 1949 aa12.49□□□□□ -0.41
CHMP6-202ENST00000571457 CHADO15335 359 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
CHMP6-202ENST00000571457 VIPR2P41587 438 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 CLCNKBP51801 687 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 KPNA1P52294 538 aaPredicted RBP12.48□□□□□ -0.41
CHMP6-202ENST00000571457 UPP1Q16831 310 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 SYNPOQ8N3V7 929 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 PPP1R10Q96QC0 940 aaKnown RBP12.48□□□□□ -0.41
CHMP6-202ENST00000571457 SLITRK6Q9H5Y7 841 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 ASAH2Q9NR71 780 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 KCNJ14Q9UNX9 436 aa12.48□□□□□ -0.41
CHMP6-202ENST00000571457 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 ARNTLO00327 626 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 ACKR2O00590 384 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 SYN3O14994 580 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 AXIN1O15169 862 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 CDC45O75419 566 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 PRKCBP05771 671 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 HSPA4P34932 840 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 CCR2P41597 374 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 ARPP19P56211 112 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 SF3A2Q15428 464 aaKnown RBP12.47□□□□□ -0.41
CHMP6-202ENST00000571457 PIK3AP1Q6ZUJ8 805 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 MAEAQ7L5Y9 396 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 CACNA2D4Q7Z3S7 1137 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 RALGPS2Q86X27 583 aaPredicted RBP12.47□□□□□ -0.41
CHMP6-202ENST00000571457 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
CHMP6-202ENST00000571457 ZSWIM3Q96MP5 696 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 CXCL16Q9H2A7 254 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 ARRDC1-AS1Q9H2J1 176 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 SLC38A7Q9NVC3 462 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 PCDHGA5Q9Y5G8 931 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 COL4A2P08572 1712 aa12.47□□□□□ -0.41
CHMP6-202ENST00000571457 CCDC163A0A0D9SF12 145 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms