RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CPNE3O75131 537 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 SOCS5O75159 536 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 RTN2O75298 545 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 OFD1O75665 1012 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 RAD17O75943 681 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 GOSR1O95249 250 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 LTFP02788 710 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 OPN1MWP04001 364 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CYP1A2P05177 515 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 POLR3DP05423 398 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 S100A6P06703 90 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 PDHA1P08559 390 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SRGAP2BP0DMP2 458 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 OPN1MW2P0DN77 364 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 OPN1MW3P0DN78 364 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 MYBL2P10244 700 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TOP1P11387 765 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 ZNF24P17028 368 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ALOX12P18054 663 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ARF4P18085 180 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 TRIM21P19474 475 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 TFEBP19484 476 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 S100A5P33763 92 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CCNFP41002 786 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SLC19A1P41440 591 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 LIFRP42702 1097 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 NOP2P46087 812 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 CRKP46108 304 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CDK8P49336 464 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SULT1E1P49888 294 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ETV1P50549 477 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ALDH3A2P51648 485 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 PRELPP51888 382 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 GTF2A1P52655 376 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 IRX1P78414 480 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 GSTO1P78417 241 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TFAP4Q01664 338 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 MLLT1Q03111 559 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 RELQ04864 619 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 KLHL30Q0D2K2 578 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TCP10Q12799 353 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ADAM15Q13444 863 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 LAPTM5Q13571 262 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 BLMHQ13867 455 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 COG2Q14746 738 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 RTN1Q16799 776 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ZSCAN23Q3MJ62 389 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SUPT20HL1Q3ZLR7 823 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CCDC38Q502W7 563 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 FKBP15Q5T1M5 1219 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CCDC183Q5T5S1 534 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 APOBEC3HQ6NTF7 200 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 POMZP3Q6PJE2 187 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 OLFML1Q6UWY5 402 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 NUP54Q7Z3B4 507 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 DNAJB7Q7Z6W7 309 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 TMEM110Q86TL2 294 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CCDC84Q86UT8 332 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 NCAPG2Q86XI2 1143 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ESX1Q8N693 406 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 AVL9Q8NBF6 648 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ACMSDQ8TDX5 336 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SLC16A10Q8TF71 515 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 UCMAQ8WVF2 138 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 RABGGTAQ92696 567 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ESR2Q92731 530 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 USP7Q93009 1102 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CNKSR1Q969H4 720 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ZNF845Q96IR2 970 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 VPS39Q96JC1 886 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CCDC43Q96MW1 224 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 USP28Q96RU2 1077 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ZSCAN10Q96SZ4 725 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 UBAC1Q9BSL1 405 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SPATA9Q9BWV2 254 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SAP130Q9H0E3 1048 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 NT5C3AQ9H0P0 336 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 STMN4Q9H169 189 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 MRPL46Q9H2W6 279 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 VCX3BQ9H321 246 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 VCPKMTQ9H867 229 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ZFYVE28Q9HCC9 887 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ABCB6Q9NP58 842 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ETAA1Q9NY74 926 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 TBC1D7Q9P0N9 293 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 ARPP21Q9UBL0 812 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 ZC3H7BQ9UGR2 993 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 CHORDC1Q9UHD1 332 aaPredicted RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 SLC13A4Q9UKG4 626 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 KCNJ14Q9UNX9 436 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 SCAF8Q9UPN6 1271 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 APOBEC2Q9Y235 224 aaKnown RBP3.83□□□□□ -1.8
SMG6-208ENST00000570874 SLC12A7Q9Y666 1083 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 CNTNAP5Q8WYK1 1306 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 LOC285556D6RIA3 1793 aa3.83□□□□□ -1.8
SMG6-208ENST00000570874 DOCK3Q8IZD9 2030 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 TRPM7Q96QT4 1865 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms