RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TBX3O15119 743 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 XYLBO75191 536 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 RPP40O75818 363 aaKnown RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 RECQL4O94761 1208 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 ABLIM3O94929 683 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 PRAMEF12O95522 483 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 PSMC3P17980 439 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 BCKDHBP21953 392 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 GLRA2P23416 452 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 CTHP32929 405 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 CLCNKBP51801 687 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 SPIRE1Q08AE8 756 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 CTTNQ14247 550 aaKnown RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 NTRK3Q16288 839 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 COL28A1Q2UY09 1125 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 FSTL4Q6MZW2 842 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 TMC8Q8IU68 726 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 NOSTRINQ8IVI9 506 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 ZNF710Q8N1W2 664 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 TTC9BQ8N6N2 239 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 ZSCAN18Q8TBC5 510 aaPredicted RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 ADAM32Q8TC27 787 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 TBCKQ8TEA7 893 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 BSNDQ8WZ55 320 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 SMARCD2Q92925 531 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 CEP170P1Q96L14 293 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 HHIPQ96QV1 700 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 MTA3Q9BTC8 594 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 INO80BQ9C086 356 aaPredicted RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 SMG9Q9H0W8 520 aaKnown RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 DNAJC25Q9H1X3 360 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 ZFP14Q9HCL3 533 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 POLD4Q9HCU8 107 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 AVENQ9NQS1 362 aaPredicted RBP8.01□□□□□ -1.13
SMG6-205ENST00000570659 STK39Q9UEW8 545 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 TCEAL9Q9UHQ7 104 aa8.01□□□□□ -1.13
SMG6-205ENST00000570659 APC2O95996 2303 aa8□□□□□ -1.13
SMG6-205ENST00000570659 CFAP46Q8IYW2 2715 aa8□□□□□ -1.13
SMG6-205ENST00000570659 MYBPHLA2RUH7 354 aa8□□□□□ -1.13
SMG6-205ENST00000570659 CARNS1A5YM72 827 aa8□□□□□ -1.13
SMG6-205ENST00000570659 INO80B-WBP1J3KQ70 363 aa8□□□□□ -1.13
SMG6-205ENST00000570659 WNT7AO00755 349 aa8□□□□□ -1.13
SMG6-205ENST00000570659 ZBTB43O43298 467 aa8□□□□□ -1.13
SMG6-205ENST00000570659 C1QL1O75973 258 aa8□□□□□ -1.13
SMG6-205ENST00000570659 MYL4P12829 197 aa8□□□□□ -1.13
SMG6-205ENST00000570659 PTPN2P17706 415 aa8□□□□□ -1.13
SMG6-205ENST00000570659 SFNP31947 248 aa8□□□□□ -1.13
SMG6-205ENST00000570659 ARL2P36404 184 aa8□□□□□ -1.13
SMG6-205ENST00000570659 DNM2P50570 870 aa8□□□□□ -1.13
SMG6-205ENST00000570659 ARPP19P56211 112 aa8□□□□□ -1.13
SMG6-205ENST00000570659 PSMC5P62195 406 aa8□□□□□ -1.13
SMG6-205ENST00000570659 CYP4A11Q02928 519 aa8□□□□□ -1.13
SMG6-205ENST00000570659 Q4G0T1 1027 aa8□□□□□ -1.13
SMG6-205ENST00000570659 EARS2Q5JPH6 523 aaKnown RBP8□□□□□ -1.13
SMG6-205ENST00000570659 NOTUMQ6P988 496 aa8□□□□□ -1.13
SMG6-205ENST00000570659 ELMSAN1Q6PJG2 1045 aa8□□□□□ -1.13
SMG6-205ENST00000570659 PDZD3Q86UT5 571 aa8□□□□□ -1.13
SMG6-205ENST00000570659 MARCH9Q86YJ5 346 aa8□□□□□ -1.13
SMG6-205ENST00000570659 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
SMG6-205ENST00000570659 FRMD1Q8N878 549 aa8□□□□□ -1.13
SMG6-205ENST00000570659 CEP120Q8N960 986 aa8□□□□□ -1.13
SMG6-205ENST00000570659 DAGLBQ8NCG7 672 aa8□□□□□ -1.13
SMG6-205ENST00000570659 OR2I1PQ8NGU4 316 aa8□□□□□ -1.13
SMG6-205ENST00000570659 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
SMG6-205ENST00000570659 DDX1Q92499 740 aaKnown RBP8□□□□□ -1.13
SMG6-205ENST00000570659 HAS1Q92839 578 aa8□□□□□ -1.13
SMG6-205ENST00000570659 DYDC2Q96IM9 177 aa8□□□□□ -1.13
SMG6-205ENST00000570659 PDZD7Q9H5P4 517 aa8□□□□□ -1.13
SMG6-205ENST00000570659 NCOA5Q9HCD5 579 aaKnown RBP8□□□□□ -1.13
SMG6-205ENST00000570659 TRPV5Q9NQA5 729 aa8□□□□□ -1.13
SMG6-205ENST00000570659 GJB4Q9NTQ9 266 aa8□□□□□ -1.13
SMG6-205ENST00000570659 INSL5Q9Y5Q6 135 aa8□□□□□ -1.13
SMG6-205ENST00000570659 NUP210Q8TEM1 1887 aaPredicted RBP8□□□□□ -1.13
SMG6-205ENST00000570659 THADAQ6YHU6 1953 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 CYP3A7-CYP3A51PA0A087WV96 503 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 A0A1B0GUA9 196 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 ZNF263O14978 683 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 SOAT2O75908 522 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 ERLIN2O94905 339 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 EGFP01133 1207 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 OR4Q2P0C623 313 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 HNRNPLP14866 589 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMG6-205ENST00000570659 CYP3A7P24462 503 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 HOXA6P31267 233 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 CNR2P34972 360 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 EPHA5P54756 1037 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 IRX4P78413 519 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 FCHO2Q0JRZ9 810 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 UVSSAQ2YD98 709 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.99□□□□□ -1.13
SMG6-205ENST00000570659 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 MFSD6LQ8IWD5 586 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 TMTC2Q8N394 836 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 IRF7Q92985 503 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 ZC3H10Q96K80 434 aaKnown RBP7.99□□□□□ -1.13
SMG6-205ENST00000570659 ZMAT2Q96NC0 199 aaKnown RBP7.99□□□□□ -1.13
SMG6-205ENST00000570659 PPP1R10Q96QC0 940 aaKnown RBP7.99□□□□□ -1.13
SMG6-205ENST00000570659 LXNQ9BS40 222 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 POLR3CQ9BUI4 534 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms