RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 HES2Q9Y543 173 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 IPPQ9Y573 584 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 CLUHO75153 1309 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 MIA3Q5JRA6 1907 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 MYH15Q9Y2K3 1946 aa7.21□□□□□ -1.26
SMG6-204ENST00000570606 TRIP11Q15643 1979 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 SERTM1A2A2V5 107 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 ARL5CA6NH57 179 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 TNFRSF10BO14763 440 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 INPPL1O15357 1258 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 TEX28O15482 410 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 USO1O60763 962 aaKnown RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 PFKFB2O60825 505 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 DTNBO60941 627 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 DGAT1O75907 488 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 NPTXRO95502 500 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 MYBP10242 640 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 HOXA11P31270 313 aaPredicted RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 NOS2P35228 1153 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 MBTD1Q05BQ5 628 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 TDGQ13569 410 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 CAPSQ13938 189 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 ANKRD1Q15327 319 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 CWF19L1Q69YN2 538 aaKnown RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 COLGALT2Q8IYK4 626 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 SMG8Q8ND04 991 aaKnown RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 SMG7Q92540 1137 aaKnown RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 STAMQ92783 540 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 ZFP42Q96MM3 310 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 EIF2AK1Q9BQI3 630 aaKnown RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 CSRNP2Q9H175 543 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 POLR3FQ9H1D9 316 aaPredicted RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 NXF3Q9H4D5 531 aaKnown RBP7.2□□□□□ -1.26
SMG6-204ENST00000570606 PIDD1Q9HB75 910 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 XPNPEP1Q9NQW7 623 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 DUSP12Q9UNI6 340 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 GIT1Q9Y2X7 761 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 VWA8A3KMH1 1905 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 WDR87Q6ZQQ6 2873 aa7.2□□□□□ -1.26
SMG6-204ENST00000570606 CCDC195A0A1B0GUA6 201 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 PRR23AA6NEV1 266 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 LRRIQ4A6NIV6 560 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 F8W810 466 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 ZBTB39O15060 712 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 NEMFO60524 1076 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 RFPL2O75678 378 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 FAM13AO94988 1023 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 ARF4P18085 180 aaPredicted RBP7.19□□□□□ -1.26
SMG6-204ENST00000570606 MPSTP25325 297 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 GPC1P35052 558 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 CLCN5P51795 746 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 PTENP60484 403 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 CREMQ03060 361 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 DSC1Q08554 894 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 GRIK3Q13003 919 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 TRIM29Q14134 588 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 EARS2Q5JPH6 523 aaKnown RBP7.19□□□□□ -1.26
SMG6-204ENST00000570606 FUT10Q6P4F1 479 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 SLC27A1Q6PCB7 646 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 GET4Q7L5D6 327 aaPredicted RBP7.19□□□□□ -1.26
SMG6-204ENST00000570606 ZBTB8OSQ8IWT0 167 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 CMASQ8NFW8 434 aaPredicted RBP7.19□□□□□ -1.26
SMG6-204ENST00000570606 RHBDD1Q8TEB9 315 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 COLEC11Q9BWP8 271 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 GRIP2Q9C0E4 1043 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 KCNK12Q9HB15 430 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 WDR6Q9NNW5 1121 aaKnown RBP7.19□□□□□ -1.26
SMG6-204ENST00000570606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMG6-204ENST00000570606 ANKEF1Q9NU02 776 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 IGSF9Q9P2J2 1179 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 PARP2Q9UGN5 583 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 DCTN4Q9UJW0 460 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 ADAM28Q9UKQ2 775 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 SF3B1O75533 1304 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMG6-204ENST00000570606 ZMYM2Q9UBW7 1377 aa7.19□□□□□ -1.26
SMG6-204ENST00000570606 CITO14578 2027 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 CEP250Q9BV73 2442 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 CACNA1IQ9P0X4 2223 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 PROB1E7EW31 1015 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 SPINT1O43278 529 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 B4GALT5O43286 388 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 NARSO43776 548 aaKnown RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 SLITRK3O94933 977 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 LYPLA2O95372 231 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 CTDNEP1O95476 244 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 NEFLP07196 543 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 SPATA31D3P0C874 917 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 RPL17P18621 184 aaKnown RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 AOC1P19801 751 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 GLRA2P23416 452 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 AKAP5P24588 427 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 NBL1P41271 181 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 RARRES1P49788 294 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 RNF144AP50876 292 aaPredicted RBP7.18□□□□□ -1.26
SMG6-204ENST00000570606 DSG1Q02413 1049 aa7.18□□□□□ -1.26
SMG6-204ENST00000570606 POU5F1BQ06416 359 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms