RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 TRIP11Q15643 1979 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 I3L4J1 428 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 MCF2P10911 925 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 CSTF1Q05048 431 aaKnown RBP23.08■■□□□ 1.29
PKD1-240ENST00000570253 PUM1Q14671 1186 aaKnown RBP eCLIP23.08■■□□□ 1.29
PKD1-240ENST00000570253 VARS2Q5ST30 1063 aaKnown RBP23.08■■□□□ 1.29
PKD1-240ENST00000570253 CYP4A22Q5TCH4 519 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 IQCEQ6IPM2 695 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 SLC8B1Q6J4K2 584 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 PDZD4Q76G19 769 aaPredicted RBP23.08■■□□□ 1.29
PKD1-240ENST00000570253 GPR161Q8N6U8 529 aaKnown RBP23.08■■□□□ 1.29
PKD1-240ENST00000570253 ELSPBP1Q96BH3 223 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 ACO2Q99798 780 aaKnown RBP23.08■■□□□ 1.29
PKD1-240ENST00000570253 CDT1Q9H211 546 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 CYP4F11Q9HBI6 524 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 POLD4Q9HCU8 107 aa23.08■■□□□ 1.29
PKD1-240ENST00000570253 CACNA1IQ9P0X4 2223 aa23.08■■□□□ 1.28
PKD1-240ENST00000570253 ARHGEF37A1IGU5 675 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 ATF2P15336 505 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 RPL9P32969 192 aaKnown RBP23.07■■□□□ 1.28
PKD1-240ENST00000570253 STRN3Q13033 797 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 APPL2Q8NEU8 664 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 FBXO18Q8NFZ0 1043 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 DNASE1L2Q92874 299 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 RMDN1Q96DB5 314 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 CORO1BQ9BR76 489 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 BRD9Q9H8M2 597 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 C17orf75Q9HAS0 396 aa23.07■■□□□ 1.28
PKD1-240ENST00000570253 MAN2B1O00754 1011 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 NPTX2P47972 431 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 PPP2R5DQ14738 602 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 TPGS2Q68CL5 300 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 ZNF280DQ6N043 979 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 CEP120Q8N960 986 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 C3orf58Q8NDZ4 430 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 TIPINQ9BVW5 301 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 ZFP14Q9HCL3 533 aa23.06■■□□□ 1.28
PKD1-240ENST00000570253 WDR87Q6ZQQ6 2873 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 CITO14578 2027 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 WDR27A2RRH5 827 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 LAD1O00515 517 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 HIP1RO75146 1068 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 ABLIM3O94929 683 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 HARSP12081 509 aaKnown RBP23.05■■□□□ 1.28
PKD1-240ENST00000570253 CEBPBP17676 345 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 CD72P21854 359 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 SDHBP21912 280 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 MARCKSP29966 332 aaPredicted RBP23.05■■□□□ 1.28
PKD1-240ENST00000570253 MCM4P33991 863 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 RPS9P46781 194 aaKnown RBP23.05■■□□□ 1.28
PKD1-240ENST00000570253 ECM1Q16610 540 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 CTXN3Q4LDR2 81 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 XKR4Q5GH76 650 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 MPZL3Q6UWV2 235 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 TCEAL8Q8IYN2 117 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 ZSCAN31Q96LW9 406 aaPredicted RBP23.05■■□□□ 1.28
PKD1-240ENST00000570253 ZNF512Q96ME7 567 aaPredicted RBP23.05■■□□□ 1.28
PKD1-240ENST00000570253 TARS2Q9BW92 718 aaKnown RBP23.05■■□□□ 1.28
PKD1-240ENST00000570253 ZSCAN32Q9NX65 697 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 MAFFQ9ULX9 164 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 PATJQ8NI35 1801 aa23.05■■□□□ 1.28
PKD1-240ENST00000570253 MICAL2O94851 1124 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 KCNE1P15382 129 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 SMTNP53814 917 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 SOX4Q06945 474 aaPredicted RBP23.04■■□□□ 1.28
PKD1-240ENST00000570253 ADCY1Q08828 1119 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 SLC5A9Q2M3M2 681 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 ALKAL1Q6UXT8 129 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 MAML2Q8IZL2 1156 aaPredicted RBP23.04■■□□□ 1.28
PKD1-240ENST00000570253 LEMD2Q8NC56 503 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 IRF7Q92985 503 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 TRMT61BQ9BVS5 477 aaKnown RBP23.04■■□□□ 1.28
PKD1-240ENST00000570253 HEBP1Q9NRV9 189 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 CNTN3Q9P232 1028 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 MTF2Q9Y483 593 aaPredicted RBP23.04■■□□□ 1.28
PKD1-240ENST00000570253 INSL5Q9Y5Q6 135 aa23.04■■□□□ 1.28
PKD1-240ENST00000570253 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.04■■□□□ 1.28
PKD1-240ENST00000570253 NOTCH4Q99466 2003 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 E9PMD0 336 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 CPB1P15086 417 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 TARSP26639 723 aaKnown RBP23.03■■□□□ 1.28
PKD1-240ENST00000570253 MATR3P43243 847 aaKnown RBP eCLIP23.03■■□□□ 1.28
PKD1-240ENST00000570253 ST3GAL1Q11201 340 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 PTGDRQ13258 359 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 TANGO2Q6ICL3 276 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 CD300LGQ6UXG3 332 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 IGSF22Q8N9C0 903 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 SUMF1Q8NBK3 374 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 CLDN23Q96B33 292 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 FAM126AQ9BYI3 521 aaPredicted RBP23.03■■□□□ 1.28
PKD1-240ENST00000570253 PTPRHQ9HD43 1115 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 SH2B1Q9NRF2 756 aaPredicted RBP23.03■■□□□ 1.28
PKD1-240ENST00000570253 ARHGAP28Q9P2N2 729 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 FBXL5Q9UKA1 691 aa23.03■■□□□ 1.28
PKD1-240ENST00000570253 DTHD1Q6ZMT9 781 aa23.02■■□□□ 1.28
PKD1-240ENST00000570253 DCLK2Q8N568 766 aa23.02■■□□□ 1.28
PKD1-240ENST00000570253 SUSD3Q96L08 255 aa23.02■■□□□ 1.28
PKD1-240ENST00000570253 IER2Q9BTL4 223 aa23.02■■□□□ 1.28
PKD1-240ENST00000570253 ASAH2Q9NR71 780 aa23.02■■□□□ 1.28
PKD1-240ENST00000570253 ANKFY1Q9P2R3 1169 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms