RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 C18orf25Q96B23 403 aaPredicted RBP24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 CDH7Q9ULB5 785 aa24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 TBX20Q9UMR3 447 aa24.59■■□□□ 1.53
RBFOX1-219ENST00000569895 TRAK2O60296 914 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 TBCAO75347 108 aaKnown RBP24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 SRFP11831 508 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 PLCG1P19174 1290 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 MCM6Q14566 821 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 KARSQ15046 597 aaKnown RBP24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 SEZ6Q53EL9 994 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 VARS2Q5ST30 1063 aaKnown RBP24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 SLC8B1Q6J4K2 584 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 SIX5Q8N196 739 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 TMEM105Q8N8V8 129 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 APPL2Q8NEU8 664 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 ATOH1Q92858 354 aaPredicted RBP24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 TSPAN18Q96SJ8 248 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 RTP3Q9BQQ7 232 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 CCSER1Q9C0I3 900 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 ZHX3Q9H4I2 956 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 BLOC1S4Q9NUP1 217 aa24.58■■□□□ 1.53
RBFOX1-219ENST00000569895 ANHXE9PGG2 379 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 K7ENM7 598 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 STK25O00506 426 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 HNRNPDLO14979 420 aaKnown RBP24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 RFX1P22670 979 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 MARCKSP29966 332 aaPredicted RBP24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 MCM4P33991 863 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 DDIT3P35638 169 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 ZNF131P52739 623 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 RSPO2Q6UXX9 243 aaPredicted RBP24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 LARP4BQ92615 738 aaKnown RBP24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 SUSD3Q96L08 255 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 CCDC39Q9UFE4 941 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 KCNH3Q9ULD8 1083 aa24.57■■□□□ 1.52
RBFOX1-219ENST00000569895 XPOTO43592 962 aaKnown RBP24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 NARSO43776 548 aaKnown RBP24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 CFHP08603 1231 aa24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 PPP2R3AQ06190 1150 aa24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 MTSS1LQ765P7 747 aa24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 KRI1Q8N9T8 703 aaKnown RBP24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 RPF1Q9H9Y2 349 aaKnown RBP24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 ZDBF2Q9HCK1 2354 aa24.56■■□□□ 1.52
RBFOX1-219ENST00000569895 H0Y858 1186 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 PRRG1O14668 218 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 ABLIM3O94929 683 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 PIGRP01833 764 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 LRG1P02750 347 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 CXCL8P10145 99 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 AOC1P19801 751 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 CYP3A5P20815 502 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 ARPP19P56211 112 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 NTHL1P78549 312 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 ROR1Q01973 937 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 GRIN1Q05586 938 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 HTR4Q13639 388 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 MRPL58Q14197 206 aaKnown RBP24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 CTXN3Q4LDR2 81 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 PABPC1LQ4VXU2 614 aaKnown RBP24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 FGF13Q92913 245 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 KIF12Q96FN5 646 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 UBQLN1Q9UMX0 589 aaKnown RBP24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 NUMBLQ9Y6R0 609 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 WDFY4Q6ZS81 3184 aa24.55■■□□□ 1.52
RBFOX1-219ENST00000569895 KMT2EQ8IZD2 1858 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 TTC26A0AVF1 554 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 OGTO15294 1046 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 MEFVO15553 781 aaPredicted RBP24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 ATF2P15336 505 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 TXLNAP40222 546 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 TPGS2Q68CL5 300 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 ZNF280DQ6N043 979 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 CD302Q8IX05 232 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 INTS4Q96HW7 963 aaKnown RBP24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 DNMT3BQ9UBC3 853 aaKnown RBP24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 MAFFQ9ULX9 164 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 CLIC4Q9Y696 253 aa24.54■■□□□ 1.52
RBFOX1-219ENST00000569895 ARHGEF37A1IGU5 675 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 TBC1D4O60343 1298 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 NPR3P17342 541 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 CWF19L1Q69YN2 538 aaKnown RBP24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 DDX12PQ92771 950 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 OXCT2Q9BYC2 517 aaPredicted RBP24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 HAPLN2Q9GZV7 340 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 SLC2A4RGQ9NR83 387 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 STK17AQ9UEE5 414 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 TUBGCP4Q9UGJ1 667 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 FBXL5Q9UKA1 691 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 PCDHB8Q9UN66 801 aa24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 MRPS23Q9Y3D9 190 aaKnown RBP24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 SRPRBQ9Y5M8 271 aaKnown RBP24.53■■□□□ 1.52
RBFOX1-219ENST00000569895 WDR27A2RRH5 827 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 PTPN2P17706 415 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 SYT1P21579 422 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 LRPAP1P30533 357 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 GTF2BQ00403 316 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 PTPAQ15257 358 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 ZBTB6Q15916 424 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 TCEAL8Q8IYN2 117 aa24.52■■□□□ 1.52
RBFOX1-219ENST00000569895 ITFG1Q8TB96 612 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms