RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TAF2Q6P1X5 1199 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 AGPAT1Q99943 283 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 OSBPL7Q9BZF2 842 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 NXF3Q9H4D5 531 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 PTCH2Q9Y6C5 1203 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 MROH7Q68CQ1 1323 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 ENC1O14682 589 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 UQCRHP07919 91 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 ACO1P21399 889 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 CRYBB1P53674 252 aaPredicted RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 AP3M2P53677 418 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 SLC27A1Q6PCB7 646 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 VPS36Q86VN1 386 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 TSC1Q92574 1164 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 SNTG2Q9NY99 539 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 MYO1AQ9UBC5 1043 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 CDY2AQ9Y6F7 541 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 GRM5P41594 1212 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 MRPS6P82932 125 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 DCAF4L1Q3SXM0 396 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 NOTUMQ6P988 496 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 SERINC5Q86VE9 423 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 FAM228AQ86W67 206 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 VTI1AQ96AJ9 217 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 ANKRD36BP1Q96IX9 119 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 PCDHB18PQ96TA0 734 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 CELF4Q9BZC1 486 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 XYLT2Q9H1B5 865 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 TNNC2P02585 160 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 MMEP08473 750 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 CCDC172P0C7W6 258 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 CYP11B1P15538 503 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 ANXA13P27216 316 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 NME8Q8N427 588 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 ACAP3Q96P50 834 aa11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 PDCD11Q14690 1871 aaKnown RBP11.75□□□□□ -0.53
PDXDC1-216ENST00000569715 GNRH1P01148 92 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 TNFAIP3P21580 790 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 SCARA5Q6ZMJ2 495 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 FMNL3Q8IVF7 1028 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 CHRNA1P02708 482 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 ATP1A1P05023 1023 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 ITGB3P05106 788 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 KRT19P08727 400 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 GRK4P32298 578 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 ACLYP53396 1101 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 FMO1Q01740 532 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 TRPC3Q13507 836 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 UBXN11Q5T124 520 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 LHX8Q68G74 356 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 SH3TC2Q8TF17 1288 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 DDX1Q92499 740 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 APOL6Q9BWW8 343 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 ZNF699Q32M78 642 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 RNF180Q86T96 592 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 IMPG2Q9BZV3 1241 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 SAGE1Q9NXZ1 904 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 POLIQ9UNA4 740 aa11.74□□□□□ -0.53
PDXDC1-216ENST00000569715 AKAP5P24588 427 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 GALCP54803 685 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 TMEM132DQ14C87 1099 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 PTGISQ16647 500 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 TMEM270Q6UE05 265 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 PCSK9Q8NBP7 692 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 ASB7Q9H672 318 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 TRPV2Q9Y5S1 764 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SCN1AP35498 2009 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 PDE6CP51160 858 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 ITGA7Q13683 1181 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 GLRA4Q5JXX5 417 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 UBR7Q8N806 425 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SNX27Q96L92 541 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 PCDHB4Q9Y5E5 795 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 MRFAP1Q9Y605 127 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 RECQL4O94761 1208 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 CD58P19256 250 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 ABCB4P21439 1286 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms