RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■□□□□ 10
EDC3-217ENST00000569606 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
EDC3-217ENST00000569606 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
EDC3-217ENST00000569606 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
EDC3-217ENST00000569606 LRFN2Q9ULH4 789 aa13.5□□□□□ -0.25
EDC3-217ENST00000569606 COL4A6Q14031 1691 aa13.5□□□□□ -0.25
EDC3-217ENST00000569606 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
EDC3-217ENST00000569606 LRRN2O75325 713 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
EDC3-217ENST00000569606 HLA-DRAP01903 254 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 AMHP03971 560 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 ITGB3P05106 788 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 THP07101 528 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 SLC9A1P19634 815 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 CYP3A5P20815 502 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 PON1P27169 355 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 PIK3CAP42336 1068 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 KLK7P49862 253 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 GATMP50440 423 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 DEFB103AP81534 67 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 SOX4Q06945 474 aaPredicted RBP13.49□□□□□ -0.25
EDC3-217ENST00000569606 CETN1Q12798 172 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 GRIK3Q13003 919 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 OTOP2Q7RTS6 562 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 EHBP1Q8NDI1 1231 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 TOP1MTQ969P6 601 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 CASD1Q96PB1 797 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 SLC38A7Q9NVC3 462 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 RAB20Q9NX57 234 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 SIX4Q9UIU6 781 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 INPP5FQ9Y2H2 1132 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
EDC3-217ENST00000569606 ITIH6Q6UXX5 1313 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 HOXA2O43364 376 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 PHACTR2O75167 634 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 UPP2O95045 317 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 POMCP01189 267 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 NCOA4Q13772 614 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 NOMO2Q5JPE7 1267 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
EDC3-217ENST00000569606 URGCPQ8TCY9 931 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
EDC3-217ENST00000569606 LSM14BQ9BX40 385 aaKnown RBP13.48□□□□□ -0.25
EDC3-217ENST00000569606 INTS2Q9H0H0 1204 aaKnown RBP13.48□□□□□ -0.25
EDC3-217ENST00000569606 GOLGA2P5Q9HBQ8 144 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 SIX2Q9NPC8 291 aa13.48□□□□□ -0.25
EDC3-217ENST00000569606 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 ZBBXA8MT70 800 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 DGKIO75912 1065 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 DDHD2O94830 711 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 KRT19P08727 400 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 LRPAP1P30533 357 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
EDC3-217ENST00000569606 KCNJ6P48051 423 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 MYL6P60660 151 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 APBA1Q02410 837 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 TRPC3Q13507 836 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 SPECC1LQ69YQ0 1117 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 TMC6Q7Z403 805 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 ABI1Q8IZP0 508 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 RSPH1Q8WYR4 309 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 HERVK_113Q902F9 699 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
EDC3-217ENST00000569606 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 XYLT2Q9H1B5 865 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 GANQ9H2C0 597 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 PLCB1Q9NQ66 1216 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 FAM207AQ9NSI2 230 aaPredicted RBP13.47□□□□□ -0.25
EDC3-217ENST00000569606 TBC1D13Q9NVG8 400 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
EDC3-217ENST00000569606 SCN1AP35498 2009 aa13.47□□□□□ -0.25
EDC3-217ENST00000569606 PIRO00625 290 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 PPEF2O14830 753 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 EPHB6O15197 1021 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 ZC3H11AO75152 810 aaKnown RBP eCLIP13.46□□□□□ -0.25
EDC3-217ENST00000569606 NOL4O94818 638 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.25
EDC3-217ENST00000569606 MAGEA10P43363 369 aaPredicted RBP13.46□□□□□ -0.25
EDC3-217ENST00000569606 RBP5P82980 135 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 DSC1Q08554 894 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 TUSC3Q13454 348 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 C9orf57Q5W0N0 161 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
EDC3-217ENST00000569606 NEK11Q8NG66 645 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
EDC3-217ENST00000569606 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 TTYH3Q9C0H2 523 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 RC3H2Q9HBD1 1191 aaKnown RBP13.46□□□□□ -0.25
EDC3-217ENST00000569606 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
EDC3-217ENST00000569606 CACNG4Q9UBN1 327 aa13.46□□□□□ -0.25
EDC3-217ENST00000569606 AGAP1Q9UPQ3 857 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms