RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 CNTN6Q9UQ52 1028 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 RALGAPA2Q2PPJ7 1873 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 NCANO14594 1321 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 TNNC2P02585 160 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 NFICP08651 508 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 TMEM191BP0C7N4 346 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 MYL6P60660 151 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 FMO1Q01740 532 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 SNX17Q15036 470 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 MAP3K21Q5TCX8 1036 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 CATSPER4Q7RTX7 472 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 NME8Q8N427 588 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 UBR7Q8N806 425 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 TMEM40Q8WWA1 233 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 ANKRD36BP1Q96IX9 119 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 PCDHB18PQ96TA0 734 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 IMPG2Q9BZV3 1241 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 XYLT2Q9H1B5 865 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 XPNPEP3Q9NQH7 507 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 GTF2IRD1Q9UHL9 959 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 CITO14578 2027 aa24.21■■□□□ 1.47
VCPKMT-205ENST00000569518 TMEM253P0C7T8 217 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 KRT5P13647 590 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 GRM5P41594 1212 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 PDE6CP51160 858 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 CDR2Q01850 454 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 NBPF20Q3BBV1 942 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 TAF2Q6P1X5 1199 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 ISCUQ9H1K1 167 aa24.2■■□□□ 1.46
VCPKMT-205ENST00000569518 MROH7Q68CQ1 1323 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 TADA3O75528 432 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 SGSM1Q2NKQ1 1148 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 JADE1Q6IE81 842 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 KLHDC9Q8NEP7 349 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 SEPT11Q9NVA2 429 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 TFRCP02786 760 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 HMGCRP04035 888 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 MMEP08473 750 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 GZMAP12544 262 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 CST5P28325 142 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 HOXD10P28358 340 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 VEGFBP49765 207 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 NCBP1Q09161 790 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 NAA30Q147X3 362 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 WHAMMP3Q1A5X7 153 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 TAF3Q5VWG9 929 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 CCSAPQ6IQ19 270 aaPredicted RBP24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 SLC27A1Q6PCB7 646 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 MNS1Q8NEH6 495 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 CXorf38Q8TB03 319 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 SIX4Q9UIU6 781 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 SAR1BQ9Y6B6 198 aa24.19■■□□□ 1.46
VCPKMT-205ENST00000569518 GRID2IPA4D2P6 1211 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 TMCO5BA8MYB1 307 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 PALMO75781 387 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 CRYBB1P53674 252 aaPredicted RBP24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 NOTUMQ6P988 496 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 APBB1IPQ7Z5R6 666 aaPredicted RBP24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 ZNF784Q8NCA9 323 aaPredicted RBP24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 ACAP3Q96P50 834 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 NIF3L1Q9GZT8 377 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 PCDHB2Q9Y5E7 798 aa24.18■■□□□ 1.46
VCPKMT-205ENST00000569518 ANKRD62A6NC57 917 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 NPTXRO95502 500 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 AXLP30530 894 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 NAP1L1P55209 391 aaKnown RBP24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 TRPC3Q13507 836 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 SMYD5Q6GMV2 418 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 C1orf127Q8N9H9 656 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 SNX12Q9UMY4 172 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 ZNF132P52740 706 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 BPIFB4P59827 614 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 GDF6Q6KF10 455 aaPredicted RBP24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 LRRC57Q8N9N7 239 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 RFFLQ8WZ73 363 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 TAF4BQ92750 862 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 TLR10Q9BXR5 811 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 C2CD2Q9Y426 696 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 CENPFP49454 3210 aa24.17■■□□□ 1.46
VCPKMT-205ENST00000569518 HTTP42858 3142 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 EFCAB8A8MWE9 144 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 RTN2O75298 545 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 PRLRP16471 622 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 IFI16Q16666 785 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 ZNF699Q32M78 642 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 SESTD1Q86VW0 696 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 ZNF677Q86XU0 584 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 TPCN2Q8NHX9 752 aa24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 CTNNBL1Q8WYA6 563 aaPredicted RBP24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 EIF2AQ9BY44 585 aaKnown RBP24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 V9GYY5 206 aaPredicted RBP24.16■■□□□ 1.46
VCPKMT-205ENST00000569518 GNRH1P01148 92 aa24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 CALCAP01258 141 aa24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 FTLP02792 175 aaPredicted RBP24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 ASGR1P07306 291 aa24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 ASPAP45381 313 aa24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 KCNA10Q16322 511 aa24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 NT5DC4Q86YG4 428 aa24.15■■□□□ 1.46
VCPKMT-205ENST00000569518 CD302Q8IX05 232 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms