RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CYP24A1Q07973 514 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 TMEM132DQ14C87 1099 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 C11orf57Q6ZUT1 292 aaPredicted RBP17.36■□□□□ 0.37
USB1-215ENST00000569252 FRMD5Q7Z6J6 570 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 CMTR2Q8IYT2 770 aaKnown RBP17.36■□□□□ 0.37
USB1-215ENST00000569252 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 LRRC43Q8N309 656 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 FBXO22Q8NEZ5 403 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 BEST2Q8NFU1 509 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 ANKRD36BP1Q96IX9 119 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 SNX27Q96L92 541 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 MFSD14AQ96MC6 490 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 ZFP42Q96MM3 310 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 CASD1Q96PB1 797 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 FUCA2Q9BTY2 467 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 THAP9Q9H5L6 903 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 CNTN3Q9P232 1028 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 NFE2L3Q9Y4A8 694 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.35■□□□□ 0.37
USB1-215ENST00000569252 SMIM28A0A1B0GU29 152 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 TTC26A0AVF1 554 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 TNNC2P02585 160 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 ALDH2P05091 517 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 KCNE1P15382 129 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 SSTR3P32745 418 aaPredicted RBP17.35■□□□□ 0.37
USB1-215ENST00000569252 CASP4P49662 377 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 SCNN1GP51170 649 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 VAMP7P51809 220 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 AP3M2P53677 418 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 ZNF445P59923 1031 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 TFAMQ00059 246 aaKnown RBP17.35■□□□□ 0.37
USB1-215ENST00000569252 GRIK3Q13003 919 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 PSMD6Q15008 389 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 DUOXA2Q1HG44 320 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 CLLU1OSQ5K130 101 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 TCERG1LQ5VWI1 586 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
USB1-215ENST00000569252 ALKAL1Q6UXT8 129 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 ALYREFQ86V81 257 aaKnown RBP17.35■□□□□ 0.37
USB1-215ENST00000569252 ZSWIM2Q8NEG5 633 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 PDE11AQ9HCR9 933 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 UBQLN1Q9UMX0 589 aaKnown RBP17.35■□□□□ 0.37
USB1-215ENST00000569252 C2CD2Q9Y426 696 aa17.35■□□□□ 0.37
USB1-215ENST00000569252 IKBKBO14920 756 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 GPR37L1O60883 481 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 PHACTR2O75167 634 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 TMEM191BP0C7N4 346 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 MTIF2P46199 727 aaKnown RBP17.34■□□□□ 0.37
USB1-215ENST00000569252 ALDH7A1P49419 539 aaKnown RBP17.34■□□□□ 0.37
USB1-215ENST00000569252 HTRA4P83105 476 aaPredicted RBP17.34■□□□□ 0.37
USB1-215ENST00000569252 ENPEPQ07075 957 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 XKR4Q5GH76 650 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 GLRA4Q5JXX5 417 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 ZC3H3Q8IXZ2 948 aaKnown RBP17.34■□□□□ 0.37
USB1-215ENST00000569252 GJD3Q8N144 294 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 TMC2Q8TDI7 906 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 ZNF689Q96CS4 500 aaPredicted RBP17.34■□□□□ 0.37
USB1-215ENST00000569252 TBC1D13Q9NVG8 400 aa17.34■□□□□ 0.37
USB1-215ENST00000569252 ADRB2P07550 413 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 GATMP50440 423 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 SPAG1Q07617 926 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 CETN1Q12798 172 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 BFSP1Q12934 665 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 CLUL1Q15846 466 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 DCAF17Q5H9S7 520 aaPredicted RBP17.33■□□□□ 0.36
USB1-215ENST00000569252 LRRC55Q6ZSA7 311 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 WDR49Q8IV35 697 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 PARD3BQ8TEW8 1205 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.36
USB1-215ENST00000569252 UROC1Q96N76 676 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 RNF19AQ9NV58 838 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 MIOSQ9NXC5 875 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 PCDHB12Q9Y5F1 795 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 TTC3P53804 2025 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 NLRC5Q86WI3 1866 aa17.33■□□□□ 0.36
USB1-215ENST00000569252 INPPL1O15357 1258 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 CLSTN1O94985 981 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 CYP3A5P20815 502 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
USB1-215ENST00000569252 OR1G1P47890 313 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 TUSC3Q13454 348 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 EPC2Q52LR7 807 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 FAM200AQ8TCP9 573 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 CNOT6LQ96LI5 555 aaKnown RBP17.32■□□□□ 0.36
USB1-215ENST00000569252 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 COLEC11Q9BWP8 271 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 FANCLQ9NW38 375 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 DPP3Q9NY33 737 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 FAN1Q9Y2M0 1017 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.32■□□□□ 0.36
USB1-215ENST00000569252 TRIOO75962 3097 aa17.32■□□□□ 0.36
USB1-215ENST00000569252 KCNJ18B7U540 433 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 PES1O00541 588 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms